This document compares the results of at least 2 CASAL model configurations (base and at least one sensitivity) and up to 6 Casal2 model configurations (3 BetaDiff and 3 ADOL-C).
The CASAL model sensitivity 1 has a smaller minimisation tolerance value than the CASAL base model (1e-9 vs. 1e-6).
The Casal2 ADOL-C and BetaDiff low tolerance models have a smaller tolerance value than the CASAL base model (1e-9 vs. 1e-6).
The main characteristics of the Test Case HOK (hoki) CASAL model are:
Observation data include:
Parameters estimated include:
## [1] "Tue Sep 28 20:28:38 2021"
## R version 3.6.3 (2020-02-29)
## Platform: x86_64-pc-linux-gnu (64-bit)
## Running under: Debian GNU/Linux 11 (bullseye)
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## Matrix products: default
## BLAS: /usr/lib/x86_64-linux-gnu/blas/libblas.so.3.9.0
## LAPACK: /usr/lib/x86_64-linux-gnu/lapack/liblapack.so.3.9.0
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## [7] LC_PAPER=en_NZ.UTF-8 LC_NAME=C
## [9] LC_ADDRESS=C LC_TELEPHONE=C
## [11] LC_MEASUREMENT=en_NZ.UTF-8 LC_IDENTIFICATION=C
##
## attached base packages:
## [1] stats graphics grDevices utils datasets methods base
##
## other attached packages:
## [1] Casal2_21.08 casal_2.30 devtools_2.4.2 usethis_2.0.1 rlist_0.4.6.2
## [6] ggthemes_4.2.4 gridExtra_2.3 coda_0.19-4 ggmcmc_1.5.1.1 ggplot2_3.3.5
## [11] tidyr_1.1.3 huxtable_5.4.0 dplyr_1.0.7 plyr_1.8.6
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## loaded via a namespace (and not attached):
## [1] Rcpp_1.0.7 lattice_0.20-41 prettyunits_1.1.1 ps_1.6.0
## [5] assertthat_0.2.1 rprojroot_2.0.2 digest_0.6.27 utf8_1.2.2
## [9] R6_2.5.1 evaluate_0.14 pillar_1.6.2 rlang_0.4.11
## [13] rstudioapi_0.13 data.table_1.14.0 callr_3.7.0 jquerylib_0.1.4
## [17] rmarkdown_2.11 desc_1.3.0 stringr_1.4.0 munsell_0.5.0
## [21] compiler_3.6.3 xfun_0.26 pkgconfig_2.0.3 pkgbuild_1.2.0
## [25] htmltools_0.5.2 tidyselect_1.1.1 tibble_3.1.4 reshape_0.8.8
## [29] fansi_0.5.0 crayon_1.4.1 withr_2.4.2 grid_3.6.3
## [33] jsonlite_1.7.2 GGally_2.1.2 gtable_0.3.0 lifecycle_1.0.0
## [37] DBI_1.1.1 magrittr_2.0.1 scales_1.1.1 cli_3.0.1
## [41] stringi_1.7.4 cachem_1.0.6 remotes_2.4.0 fs_1.5.0
## [45] testthat_3.0.4 bslib_0.3.0 ellipsis_0.3.2 generics_0.1.0
## [49] vctrs_0.3.8 RColorBrewer_1.1-2 tools_3.6.3 glue_1.4.2
## [53] purrr_0.3.4 processx_3.5.2 pkgload_1.2.2 fastmap_1.1.0
## [57] yaml_2.2.1 colorspace_2.0-2 sessioninfo_1.1.1 memoise_2.0.0
## [61] knitr_1.34 sass_0.4.0
source('../../R-functions/report_read_in_CASAL_MPD_files.R')
source('../../R-functions/report_read_in_Casal2_MPD_files.R')
Tables of parameter estimates and objective function components for the CASAL and Casal2 model MPD results
| rownames | Base_Model | Sensitivity_1 | Percent_Diff |
|---|---|---|---|
| q[CSacous].q | 0.43120 | 0.43120 | 0.000 |
| q[WCacous].q | 0.30030 | 0.30020 | 0.033 |
| q[CRsum].q | 0.07431 | 0.07431 | 0.000 |
| q[SAsum].q | 0.05925 | 0.05925 | 0.000 |
| q[SAaut].q | 0.06717 | 0.06717 | 0.000 |
| relative_abundance[CRsumbio].cv_process_error | 0.14050 | 0.14050 | 0.000 |
| relative_abundance[SAsumbio].cv_process_error | 0.43060 | 0.43060 | 0.000 |
| log_B0_total | 14.34000 | 14.34000 | 0.000 |
| B0_prop_stock1 | 0.32870 | 0.32870 | 0.000 |
| natural_mortality.all | 0.29600 | 0.29600 | 0.000 |
| selectivity[Wspsl].shift_a | -0.21740 | -0.21740 | 0.000 |
| recruitment[E].YCS1 | 0.44780 | 0.44780 | 0.000 |
| recruitment[E].YCS2 | 0.72680 | 0.72680 | 0.000 |
| recruitment[E].YCS3 | 0.78450 | 0.78450 | 0.000 |
| recruitment[E].YCS4 | 1.36000 | 1.36000 | 0.000 |
| recruitment[E].YCS5 | 0.98770 | 0.98780 | -0.010 |
| recruitment[E].YCS6 | 0.32930 | 0.32930 | 0.000 |
| recruitment[E].YCS7 | 0.44720 | 0.44720 | 0.000 |
| recruitment[E].YCS8 | 0.26560 | 0.26560 | 0.000 |
| recruitment[E].YCS9 | 0.43420 | 0.43420 | 0.000 |
| recruitment[E].YCS10 | 0.48800 | 0.48800 | 0.000 |
| recruitment[E].YCS11 | 0.39570 | 0.39570 | 0.000 |
| recruitment[E].YCS12 | 0.21790 | 0.21790 | 0.000 |
| recruitment[E].YCS13 | 1.03600 | 1.03600 | 0.000 |
| recruitment[E].YCS14 | 0.95890 | 0.95890 | 0.000 |
| recruitment[E].YCS15 | 0.42900 | 0.42900 | 0.000 |
| recruitment[E].YCS16 | 0.13810 | 0.13810 | 0.000 |
| recruitment[E].YCS17 | 0.37500 | 0.37500 | 0.000 |
| recruitment[E].YCS18 | 0.39170 | 0.39160 | 0.026 |
| recruitment[E].YCS19 | 0.38310 | 0.38310 | 0.000 |
| recruitment[E].YCS20 | 0.56290 | 0.56290 | 0.000 |
| recruitment[E].YCS21 | 0.26400 | 0.26400 | 0.000 |
| recruitment[E].YCS22 | 0.28450 | 0.28450 | 0.000 |
| recruitment[E].YCS23 | 0.45000 | 0.45000 | 0.000 |
| recruitment[E].YCS24 | 0.25310 | 0.25310 | 0.000 |
| recruitment[E].YCS25 | 0.06000 | 0.06000 | 0.000 |
| recruitment[E].YCS26 | 0.46220 | 0.46220 | 0.000 |
| recruitment[E].YCS27 | 0.16160 | 0.16160 | 0.000 |
| recruitment[E].YCS28 | 0.26690 | 0.26690 | 0.000 |
| recruitment[E].YCS29 | 0.50040 | 0.50040 | 0.000 |
| recruitment[E].YCS30 | 0.52000 | 0.52000 | 0.000 |
| recruitment[E].YCS31 | 0.50880 | 0.50880 | 0.000 |
| recruitment[E].YCS32 | 0.60060 | 0.60060 | 0.000 |
| recruitment[E].YCS33 | 0.52210 | 0.52210 | 0.000 |
| recruitment[E].YCS34 | 0.37300 | 0.37300 | 0.000 |
| recruitment[E].YCS35 | 0.52680 | 0.52680 | 0.000 |
| recruitment[E].YCS36 | 0.15860 | 0.15860 | 0.000 |
| recruitment[E].YCS37 | 0.66060 | 0.66060 | 0.000 |
| recruitment[E].YCS38 | 0.15600 | 0.15600 | 0.000 |
| recruitment[E].YCS39 | 0.18580 | 0.18580 | 0.000 |
| recruitment[E].YCS40 | 0.73060 | 0.73060 | 0.000 |
| recruitment[E].YCS41 | 0.73910 | 0.73900 | 0.014 |
| recruitment[E].YCS42 | 1.19500 | 1.19500 | 0.000 |
| recruitment[W].YCS1 | 0.45700 | 0.45700 | 0.000 |
| recruitment[W].YCS2 | 0.82220 | 0.82220 | 0.000 |
| recruitment[W].YCS3 | 0.67000 | 0.67000 | 0.000 |
| recruitment[W].YCS4 | 0.65390 | 0.65390 | 0.000 |
| recruitment[W].YCS5 | 0.46590 | 0.46590 | 0.000 |
| recruitment[W].YCS6 | 0.51510 | 0.51510 | 0.000 |
| recruitment[W].YCS7 | 0.57820 | 0.57820 | 0.000 |
| recruitment[W].YCS8 | 0.47330 | 0.47330 | 0.000 |
| recruitment[W].YCS9 | 0.87190 | 0.87190 | 0.000 |
| recruitment[W].YCS10 | 0.83640 | 0.83650 | -0.012 |
| recruitment[W].YCS11 | 0.32020 | 0.32020 | 0.000 |
| recruitment[W].YCS12 | 0.16500 | 0.16500 | 0.000 |
| recruitment[W].YCS13 | 1.47600 | 1.47600 | 0.000 |
| recruitment[W].YCS14 | 0.77270 | 0.77280 | -0.013 |
| recruitment[W].YCS15 | 0.08135 | 0.08135 | 0.000 |
| recruitment[W].YCS16 | 0.08158 | 0.08158 | 0.000 |
| recruitment[W].YCS17 | 0.89280 | 0.89280 | 0.000 |
| recruitment[W].YCS18 | 1.26800 | 1.26800 | 0.000 |
| recruitment[W].YCS19 | 0.37720 | 0.37720 | 0.000 |
| recruitment[W].YCS20 | 0.95940 | 0.95940 | 0.000 |
| recruitment[W].YCS21 | 0.22110 | 0.22110 | 0.000 |
| recruitment[W].YCS22 | 0.19720 | 0.19720 | 0.000 |
| recruitment[W].YCS23 | 0.23790 | 0.23800 | -0.042 |
| recruitment[W].YCS24 | 0.20290 | 0.20290 | 0.000 |
| recruitment[W].YCS25 | 0.06000 | 0.06000 | 0.000 |
| recruitment[W].YCS26 | 0.37300 | 0.37300 | 0.000 |
| recruitment[W].YCS27 | 0.09548 | 0.09548 | 0.000 |
| recruitment[W].YCS28 | 0.79560 | 0.79560 | 0.000 |
| recruitment[W].YCS29 | 0.46520 | 0.46520 | 0.000 |
| recruitment[W].YCS30 | 0.51660 | 0.51660 | 0.000 |
| recruitment[W].YCS31 | 0.51130 | 0.51130 | 0.000 |
| recruitment[W].YCS32 | 0.75540 | 0.75540 | 0.000 |
| recruitment[W].YCS33 | 0.63890 | 0.63890 | 0.000 |
| recruitment[W].YCS34 | 0.61690 | 0.61690 | 0.000 |
| recruitment[W].YCS35 | 0.57840 | 0.57840 | 0.000 |
| recruitment[W].YCS36 | 0.14550 | 0.14550 | 0.000 |
| recruitment[W].YCS37 | 0.97480 | 0.97480 | 0.000 |
| recruitment[W].YCS38 | 0.16020 | 0.16020 | 0.000 |
| recruitment[W].YCS39 | 0.24440 | 0.24440 | 0.000 |
| recruitment[W].YCS40 | 2.19700 | 2.19700 | 0.000 |
| recruitment[W].YCS41 | 2.15200 | 2.15200 | 0.000 |
| recruitment[W].YCS42 | 1.19500 | 1.19500 | 0.000 |
| migration[Whome].rates_all1 | 0.32780 | 0.32780 | 0.000 |
| migration[Whome].rates_all2 | 0.30780 | 0.30780 | 0.000 |
| migration[Whome].rates_all3 | 0.47620 | 0.47620 | 0.000 |
| migration[Whome].rates_all4 | 0.14180 | 0.14180 | 0.000 |
| migration[Whome].rates_all5 | 0.46850 | 0.46840 | 0.021 |
| migration[Whome].rates_all6 | 0.74980 | 0.75030 | -0.067 |
| migration[Whome].rates_all7 | 0.79470 | 0.78840 | 0.793 |
| migration[Whome].rates_all8 | 1.00000 | 1.00000 | 0.000 |
| migration[Espmg].rates_all1 | 0.00566 | 0.00566 | 0.000 |
| migration[Espmg].rates_all2 | 0.16020 | 0.16020 | 0.000 |
| migration[Espmg].rates_all3 | 0.32410 | 0.32410 | 0.000 |
| migration[Espmg].rates_all4 | 0.43120 | 0.43120 | 0.000 |
| migration[Espmg].rates_all5 | 0.38550 | 0.38550 | 0.000 |
| migration[Espmg].rates_all6 | 0.46540 | 0.46530 | 0.021 |
| migration[Espmg].rates_all7 | 0.59900 | 0.59900 | 0.000 |
| migration[Espmg].rates_all8 | 0.60780 | 0.60780 | 0.000 |
| migration[Wspmg].rates_all1 | 0.10610 | 0.10610 | 0.000 |
| migration[Wspmg].rates_all2 | 0.28770 | 0.28770 | 0.000 |
| migration[Wspmg].rates_all3 | 0.27080 | 0.27080 | 0.000 |
| migration[Wspmg].rates_all4 | 0.45530 | 0.45530 | 0.000 |
| migration[Wspmg].rates_all5 | 0.48470 | 0.48470 | 0.000 |
| migration[Wspmg].rates_all6 | 0.52710 | 0.52710 | 0.000 |
| migration[Wspmg].rates_all7 | 0.66060 | 0.66060 | 0.000 |
| migration[Wspmg].rates_all8 | 0.59630 | 0.59630 | 0.000 |
| selectivity[Enspsl].all1 | 3.56700 | 3.56700 | 0.000 |
| selectivity[Enspsl].all2 | 1.22100 | 1.22100 | 0.000 |
| selectivity[Enspsl].all3 | 15.71000 | 15.71000 | 0.000 |
| selectivity[Wnspsl].all1 | 5.34100 | 5.34100 | 0.000 |
| selectivity[Wnspsl].all2 | 2.83900 | 2.83900 | 0.000 |
| selectivity[Wnspsl].all3 | 13.38000 | 13.38000 | 0.000 |
| selectivity[Espsl].all1 | 10.88000 | 10.88000 | 0.000 |
| selectivity[Espsl].all2 | 11.68000 | 11.68000 | 0.000 |
| selectivity[Espsl].all3 | 3.98200 | 3.98200 | 0.000 |
| selectivity[CRsl].all1 | 1.00000 | 1.00000 | 0.000 |
| selectivity[CRsl].all2 | 1.00000 | 1.00000 | 0.000 |
| selectivity[CRsl].all3 | 9.30000 | 9.30000 | 0.000 |
| selectivity[SAsl].all1 | 14.25000 | 14.25000 | 0.000 |
| selectivity[SAsl].all2 | 8.75500 | 8.75600 | -0.011 |
| selectivity[SAsl].all3 | 1.31500 | 1.31500 | 0.000 |
| rownames | betadiff_casal_flags_on | betadiff_casal_flags_off | betadiff_casal_flags_on_low_tol | adolc_casal_flags_on | adolc_casal_flags_off | adolc_casal_flags_on_low_tol |
|---|---|---|---|---|---|---|
| catchability[CSacous].q | 0.42724 | 0.42786 | 0.43116 | 0.43829 | 0.43770 | 0.43829 |
| catchability[WCacous].q | 0.31284 | 0.31244 | 0.30024 | 0.27303 | 0.27856 | 0.27303 |
| catchability[CRsum].q | 0.06832 | 0.06812 | 0.07431 | 0.08044 | 0.07817 | 0.08044 |
| catchability[SAsum].q | 0.06717 | 0.06706 | 0.05925 | 0.04403 | 0.04676 | 0.04403 |
| catchability[SAaut].q | 0.07578 | 0.07563 | 0.06717 | 0.04760 | 0.05060 | 0.04760 |
| observation[CRsumbio].process_error | 0.14094 | 0.14089 | 0.14048 | 0.14956 | 0.14992 | 0.14956 |
| observation[SAsumbio].process_error | 0.42364 | 0.42381 | 0.43061 | 0.40906 | 0.40764 | 0.40906 |
| process[recruit_E].b0 | 548395.00000 | 547497.00000 | 555125.00000 | 564399.00000 | 561440.00000 | 564399.00000 |
| process[recruit_W].b0 | 1082670.00000 | 1083360.00000 | 1133680.00000 | 1246900.00000 | 1220960.00000 | 1246900.00000 |
| process[Instant_mortality].m{west.sa} | 0.31271 | 0.31293 | 0.29598 | 0.26632 | 0.27151 | 0.26632 |
| time_varying[shifted_mu].a | -0.22921 | -0.22959 | -0.21744 | -0.17795 | -0.17121 | -0.17795 |
| process[recruit_E].ycs_values{1975} | 0.44537 | 0.44590 | 0.44782 | 0.44226 | 0.44368 | 0.44226 |
| process[recruit_E].ycs_values{1976} | 0.72940 | 0.73052 | 0.72680 | 0.70501 | 0.70695 | 0.70501 |
| process[recruit_E].ycs_values{1977} | 0.79231 | 0.79333 | 0.78454 | 0.75637 | 0.75887 | 0.75637 |
| process[recruit_E].ycs_values{1978} | 1.38645 | 1.38827 | 1.36001 | 1.29318 | 1.30663 | 1.29318 |
| process[recruit_E].ycs_values{1979} | 1.00265 | 1.00372 | 0.98776 | 0.94780 | 0.95478 | 0.94780 |
| process[recruit_E].ycs_values{1980} | 0.33437 | 0.33462 | 0.32932 | 0.31728 | 0.31857 | 0.31728 |
| process[recruit_E].ycs_values{1981} | 0.45502 | 0.45535 | 0.44723 | 0.42896 | 0.43281 | 0.42896 |
| process[recruit_E].ycs_values{1982} | 0.26974 | 0.26989 | 0.26556 | 0.25612 | 0.25738 | 0.25612 |
| process[recruit_E].ycs_values{1983} | 0.44106 | 0.44100 | 0.43418 | 0.41937 | 0.42138 | 0.41937 |
| process[recruit_E].ycs_values{1984} | 0.49412 | 0.49422 | 0.48804 | 0.47409 | 0.47613 | 0.47409 |
| process[recruit_E].ycs_values{1985} | 0.40010 | 0.40014 | 0.39570 | 0.38562 | 0.38707 | 0.38562 |
| process[recruit_E].ycs_values{1986} | 0.21978 | 0.21982 | 0.21791 | 0.21369 | 0.21436 | 0.21369 |
| process[recruit_E].ycs_values{1987} | 1.04131 | 1.04095 | 1.03640 | 1.01491 | 1.01581 | 1.01491 |
| process[recruit_E].ycs_values{1988} | 0.96346 | 0.96315 | 0.95891 | 0.92921 | 0.92974 | 0.92921 |
| process[recruit_E].ycs_values{1989} | 0.43095 | 0.43112 | 0.42899 | 0.42652 | 0.42682 | 0.42652 |
| process[recruit_E].ycs_values{1990} | 0.13797 | 0.13798 | 0.13810 | 0.13941 | 0.13937 | 0.13941 |
| process[recruit_E].ycs_values{1991} | 0.37385 | 0.37335 | 0.37500 | 0.37059 | 0.36982 | 0.37059 |
| process[recruit_E].ycs_values{1992} | 0.38858 | 0.38757 | 0.39164 | 0.38892 | 0.38683 | 0.38892 |
| process[recruit_E].ycs_values{1993} | 0.37995 | 0.37988 | 0.38310 | 0.39087 | 0.38935 | 0.39087 |
| process[recruit_E].ycs_values{1994} | 0.55794 | 0.55726 | 0.56285 | 0.55320 | 0.55071 | 0.55320 |
| process[recruit_E].ycs_values{1995} | 0.26178 | 0.26178 | 0.26399 | 0.26716 | 0.26614 | 0.26716 |
| process[recruit_E].ycs_values{1996} | 0.28251 | 0.28248 | 0.28447 | 0.28982 | 0.28898 | 0.28982 |
| process[recruit_E].ycs_values{1997} | 0.44781 | 0.44759 | 0.45003 | 0.45227 | 0.45065 | 0.45227 |
| process[recruit_E].ycs_values{1998} | 0.25264 | 0.25249 | 0.25307 | 0.25168 | 0.25128 | 0.25168 |
| process[recruit_E].ycs_values{1999} | 0.06000 | 0.06000 | 0.06000 | 0.06042 | 0.06050 | 0.06042 |
| process[recruit_E].ycs_values{2000} | 0.46013 | 0.45987 | 0.46220 | 0.46516 | 0.46407 | 0.46516 |
| process[recruit_E].ycs_values{2001} | 0.16086 | 0.16087 | 0.16165 | 0.16496 | 0.16481 | 0.16496 |
| process[recruit_E].ycs_values{2002} | 0.26611 | 0.26560 | 0.26689 | 0.26490 | 0.26423 | 0.26490 |
| process[recruit_E].ycs_values{2003} | 0.49959 | 0.49943 | 0.50038 | 0.50607 | 0.50555 | 0.50607 |
| process[recruit_E].ycs_values{2004} | 0.52053 | 0.52031 | 0.52003 | 0.52433 | 0.52480 | 0.52433 |
| process[recruit_E].ycs_values{2005} | 0.50764 | 0.50754 | 0.50882 | 0.51668 | 0.51632 | 0.51668 |
| process[recruit_E].ycs_values{2006} | 0.60013 | 0.59986 | 0.60055 | 0.60752 | 0.60760 | 0.60752 |
| process[recruit_E].ycs_values{2007} | 0.52088 | 0.52080 | 0.52215 | 0.53989 | 0.53998 | 0.53989 |
| process[recruit_E].ycs_values{2008} | 0.37115 | 0.37047 | 0.37300 | 0.37575 | 0.37469 | 0.37575 |
| process[recruit_E].ycs_values{2009} | 0.52790 | 0.52786 | 0.52681 | 0.54772 | 0.54828 | 0.54772 |
| process[recruit_E].ycs_values{2010} | 0.15695 | 0.15690 | 0.15864 | 0.16598 | 0.16514 | 0.16598 |
| process[recruit_E].ycs_values{2011} | 0.66047 | 0.66029 | 0.66058 | 0.68223 | 0.68177 | 0.68223 |
| process[recruit_E].ycs_values{2012} | 0.15554 | 0.15558 | 0.15600 | 0.16216 | 0.16198 | 0.16216 |
| process[recruit_E].ycs_values{2013} | 0.18518 | 0.18518 | 0.18584 | 0.19337 | 0.19281 | 0.19337 |
| process[recruit_E].ycs_values{2014} | 0.72844 | 0.72808 | 0.73062 | 0.77024 | 0.77071 | 0.77024 |
| process[recruit_E].ycs_values{2015} | 0.75587 | 0.75231 | 0.73900 | 0.67528 | 0.68088 | 0.67528 |
| process[recruit_E].ycs_values{2016} | 1.18886 | 1.18938 | 1.19515 | 1.31568 | 1.31862 | 1.31568 |
| process[recruit_W].ycs_values{1975} | 0.45869 | 0.45872 | 0.45702 | 0.46544 | 0.47243 | 0.46544 |
| process[recruit_W].ycs_values{1976} | 0.81422 | 0.81433 | 0.82218 | 0.87716 | 0.84528 | 0.87716 |
| process[recruit_W].ycs_values{1977} | 0.68514 | 0.68494 | 0.67000 | 0.68696 | 0.67014 | 0.68696 |
| process[recruit_W].ycs_values{1978} | 0.66937 | 0.66905 | 0.65390 | 0.64637 | 0.65166 | 0.64637 |
| process[recruit_W].ycs_values{1979} | 0.47307 | 0.47275 | 0.46590 | 0.46557 | 0.46744 | 0.46557 |
| process[recruit_W].ycs_values{1980} | 0.52064 | 0.52052 | 0.51512 | 0.51779 | 0.52102 | 0.51779 |
| process[recruit_W].ycs_values{1981} | 0.58344 | 0.58328 | 0.57824 | 0.58379 | 0.58855 | 0.58379 |
| process[recruit_W].ycs_values{1982} | 0.47462 | 0.47440 | 0.47328 | 0.48132 | 0.48308 | 0.48132 |
| process[recruit_W].ycs_values{1983} | 0.87309 | 0.87375 | 0.87192 | 0.89450 | 0.89795 | 0.89450 |
| process[recruit_W].ycs_values{1984} | 0.83633 | 0.83738 | 0.83646 | 0.86422 | 0.86874 | 0.86422 |
| process[recruit_W].ycs_values{1985} | 0.31942 | 0.31975 | 0.32024 | 0.33091 | 0.33247 | 0.33091 |
| process[recruit_W].ycs_values{1986} | 0.16493 | 0.16484 | 0.16497 | 0.16942 | 0.16910 | 0.16942 |
| process[recruit_W].ycs_values{1987} | 1.48007 | 1.48065 | 1.47555 | 1.56228 | 1.55638 | 1.56228 |
| process[recruit_W].ycs_values{1988} | 0.77454 | 0.77530 | 0.77276 | 0.81367 | 0.81027 | 0.81367 |
| process[recruit_W].ycs_values{1989} | 0.08148 | 0.08147 | 0.08134 | 0.08125 | 0.08138 | 0.08125 |
| process[recruit_W].ycs_values{1990} | 0.08183 | 0.08179 | 0.08158 | 0.08066 | 0.08104 | 0.08066 |
| process[recruit_W].ycs_values{1991} | 0.89197 | 0.89189 | 0.89280 | 0.85522 | 0.85385 | 0.85522 |
| process[recruit_W].ycs_values{1992} | 1.26757 | 1.26783 | 1.26778 | 1.24792 | 1.25111 | 1.24792 |
| process[recruit_W].ycs_values{1993} | 0.37652 | 0.37648 | 0.37722 | 0.37426 | 0.37573 | 0.37426 |
| process[recruit_W].ycs_values{1994} | 0.95579 | 0.95557 | 0.95939 | 0.99518 | 0.99455 | 0.99518 |
| process[recruit_W].ycs_values{1995} | 0.22026 | 0.22015 | 0.22113 | 0.22163 | 0.22190 | 0.22163 |
| process[recruit_W].ycs_values{1996} | 0.19632 | 0.19626 | 0.19718 | 0.18649 | 0.18707 | 0.18649 |
| process[recruit_W].ycs_values{1997} | 0.23643 | 0.23678 | 0.23795 | 0.23369 | 0.23544 | 0.23369 |
| process[recruit_W].ycs_values{1998} | 0.20041 | 0.20061 | 0.20292 | 0.21102 | 0.21130 | 0.21102 |
| process[recruit_W].ycs_values{1999} | 0.06000 | 0.06000 | 0.06000 | 0.06035 | 0.06041 | 0.06035 |
| process[recruit_W].ycs_values{2000} | 0.37089 | 0.37133 | 0.37304 | 0.37965 | 0.38049 | 0.37965 |
| process[recruit_W].ycs_values{2001} | 0.09506 | 0.09510 | 0.09548 | 0.09669 | 0.09680 | 0.09669 |
| process[recruit_W].ycs_values{2002} | 0.79553 | 0.79576 | 0.79558 | 0.79999 | 0.80172 | 0.79999 |
| process[recruit_W].ycs_values{2003} | 0.46570 | 0.46588 | 0.46517 | 0.46952 | 0.47113 | 0.46952 |
| process[recruit_W].ycs_values{2004} | 0.51761 | 0.51784 | 0.51662 | 0.52101 | 0.52279 | 0.52101 |
| process[recruit_W].ycs_values{2005} | 0.51305 | 0.51314 | 0.51126 | 0.51461 | 0.51660 | 0.51461 |
| process[recruit_W].ycs_values{2006} | 0.75475 | 0.75487 | 0.75544 | 0.74840 | 0.74983 | 0.74840 |
| process[recruit_W].ycs_values{2007} | 0.63692 | 0.63676 | 0.63891 | 0.61722 | 0.61759 | 0.61722 |
| process[recruit_W].ycs_values{2008} | 0.61564 | 0.61614 | 0.61686 | 0.60578 | 0.60637 | 0.60578 |
| process[recruit_W].ycs_values{2009} | 0.57305 | 0.57292 | 0.57841 | 0.55919 | 0.55759 | 0.55919 |
| process[recruit_W].ycs_values{2010} | 0.14618 | 0.14626 | 0.14547 | 0.14071 | 0.14150 | 0.14071 |
| process[recruit_W].ycs_values{2011} | 0.96708 | 0.96669 | 0.97478 | 0.94359 | 0.94060 | 0.94359 |
| process[recruit_W].ycs_values{2012} | 0.15909 | 0.15897 | 0.16016 | 0.15558 | 0.15513 | 0.15558 |
| process[recruit_W].ycs_values{2013} | 0.24402 | 0.24389 | 0.24444 | 0.22229 | 0.22166 | 0.22229 |
| process[recruit_W].ycs_values{2014} | 2.18651 | 2.18474 | 2.19657 | 2.08545 | 2.08160 | 2.08545 |
| process[recruit_W].ycs_values{2015} | 2.14758 | 2.14969 | 2.15204 | 2.13078 | 2.13103 | 2.13078 |
| process[recruit_W].ycs_values{2016} | 1.18909 | 1.18961 | 1.19539 | 1.31594 | 1.31888 | 1.31594 |
| selectivity[sel_Whome].v{1} | 0.32193 | 0.32136 | 0.32783 | 0.25407 | 0.24825 | 0.25407 |
| selectivity[sel_Whome].v{2} | 0.28491 | 0.28386 | 0.30778 | 0.18100 | 0.16819 | 0.18100 |
| selectivity[sel_Whome].v{3} | 0.45972 | 0.45775 | 0.47620 | 0.56748 | 0.55945 | 0.56748 |
| selectivity[sel_Whome].v{4} | 0.13549 | 0.13503 | 0.14184 | 0.31038 | 0.31166 | 0.31038 |
| selectivity[sel_Whome].v{5} | 0.43782 | 0.43169 | 0.46836 | 0.56184 | 0.54812 | 0.56184 |
| selectivity[sel_Whome].v{6} | 0.70821 | 0.71891 | 0.75026 | 0.83804 | 0.83594 | 0.83804 |
| selectivity[sel_Whome].v{7} | 0.99991 | 0.75961 | 0.78841 | 1.00000 | 1.00000 | 1.00000 |
| selectivity[sel_Espmg].v{1} | 0.00564 | 0.00564 | 0.00566 | 0.00470 | 0.00461 | 0.00470 |
| selectivity[sel_Espmg].v{2} | 0.15912 | 0.15901 | 0.16021 | 0.14082 | 0.13857 | 0.14082 |
| selectivity[sel_Espmg].v{3} | 0.32082 | 0.32056 | 0.32411 | 0.29774 | 0.29407 | 0.29774 |
| selectivity[sel_Espmg].v{4} | 0.42547 | 0.42513 | 0.43123 | 0.41211 | 0.40826 | 0.41211 |
| selectivity[sel_Espmg].v{5} | 0.37953 | 0.37926 | 0.38546 | 0.38060 | 0.37813 | 0.38060 |
| selectivity[sel_Espmg].v{6} | 0.45876 | 0.45847 | 0.46535 | 0.46940 | 0.46783 | 0.46940 |
| selectivity[sel_Espmg].v{7} | 0.59081 | 0.59044 | 0.59902 | 0.61216 | 0.61220 | 0.61216 |
| selectivity[sel_Espmg].v{8} | 0.61100 | 0.61064 | 0.60778 | 0.60742 | 0.61114 | 0.60742 |
| selectivity[sel_Wspmg].v{1} | 0.10556 | 0.10553 | 0.10614 | 0.12197 | 0.12118 | 0.12197 |
| selectivity[sel_Wspmg].v{2} | 0.29136 | 0.29139 | 0.28774 | 0.37077 | 0.37559 | 0.37077 |
| selectivity[sel_Wspmg].v{3} | 0.27068 | 0.27066 | 0.27076 | 0.27168 | 0.27078 | 0.27168 |
| selectivity[sel_Wspmg].v{4} | 0.45527 | 0.45520 | 0.45525 | 0.44589 | 0.44410 | 0.44589 |
| selectivity[sel_Wspmg].v{5} | 0.48421 | 0.48434 | 0.48466 | 0.48237 | 0.48097 | 0.48237 |
| selectivity[sel_Wspmg].v{6} | 0.52496 | 0.52398 | 0.52711 | 0.53433 | 0.53274 | 0.53433 |
| selectivity[sel_Wspmg].v{7} | 0.65298 | 0.65591 | 0.66062 | 0.67481 | 0.67392 | 0.67481 |
| selectivity[sel_Wspmg].v{8} | 0.60153 | 0.60101 | 0.59627 | 0.59152 | 0.59594 | 0.59152 |
| selectivity[Enspsl].mu | 3.57318 | 3.57227 | 3.56716 | 3.74402 | 3.75335 | 3.74402 |
| selectivity[Enspsl].sigma_l | 1.22245 | 1.22206 | 1.22108 | 1.32447 | 1.32933 | 1.32447 |
| selectivity[Enspsl].sigma_r | 49.99930 | 50.00000 | 15.71370 | 10.81980 | 11.42320 | 10.81980 |
| selectivity[Wnspsl].mu | 5.32840 | 5.32952 | 5.34117 | 14.38600 | 14.51750 | 14.38600 |
| selectivity[Wnspsl].sigma_l | 2.77815 | 2.77845 | 2.83934 | 49.26740 | 49.03790 | 49.26740 |
| selectivity[Wnspsl].sigma_r | 49.99920 | 49.99990 | 13.37890 | 1.00382 | 1.00451 | 1.00382 |
| selectivity[Espsl].mu | 11.25670 | 11.25470 | 10.87880 | 10.50100 | 10.62730 | 10.50100 |
| selectivity[Espsl].sigma_l | 10.86740 | 10.85940 | 11.67750 | 49.93370 | 49.92180 | 49.93370 |
| selectivity[Espsl].sigma_r | 4.02625 | 4.02912 | 3.98165 | 3.80384 | 3.78780 | 3.80384 |
| selectivity[CRsl].mu | 1.00000 | 1.00000 | 1.00000 | 1.00199 | 1.00235 | 1.00199 |
| selectivity[CRsl].sigma_l | 46.52130 | 46.52210 | 46.02310 | 49.98790 | 49.98580 | 49.98790 |
| selectivity[CRsl].sigma_r | 10.09280 | 10.08780 | 9.30042 | 8.43285 | 8.57003 | 8.43285 |
| selectivity[SAsl].mu | 14.86840 | 14.86480 | 14.25230 | 13.04680 | 14.50330 | 13.04680 |
| selectivity[SAsl].sigma_l | 8.69466 | 8.69281 | 8.75558 | 10.63250 | 11.70200 | 10.63250 |
| selectivity[SAsl].sigma_r | 1.00000 | 1.00000 | 1.31519 | 2.04148 | 1.01795 | 2.04148 |
| rownames | betadiff_casal_flags_on | betadiff_casal_flags_off | betadiff_casal_flags_on_low_tol | adolc_casal_flags_on | adolc_casal_flags_off | adolc_casal_flags_on_low_tol |
|---|---|---|---|---|---|---|
| catchability[CSacous].q | 0.000 | -0.146 | -0.918 | -2.587 | -2.449 | -2.587 |
| catchability[WCacous].q | 0.000 | 0.128 | 4.027 | 12.726 | 10.958 | 12.726 |
| catchability[CRsum].q | 0.000 | 0.298 | -8.765 | -17.738 | -14.416 | -17.738 |
| catchability[SAsum].q | 0.000 | 0.171 | 11.796 | 34.450 | 30.382 | 34.450 |
| catchability[SAaut].q | 0.000 | 0.188 | 11.363 | 37.182 | 33.228 | 37.182 |
| observation[CRsumbio].process_error | 0.000 | 0.035 | 0.328 | -6.110 | -6.368 | -6.110 |
| observation[SAsumbio].process_error | 0.000 | -0.040 | -1.645 | 3.442 | 3.776 | 3.442 |
| process[recruit_E].b0 | 0.000 | 0.164 | -1.227 | -2.918 | -2.379 | -2.918 |
| process[recruit_W].b0 | 0.000 | -0.064 | -4.712 | -15.169 | -12.773 | -15.169 |
| process[Instant_mortality].m{west.sa} | 0.000 | -0.070 | 5.349 | 14.836 | 13.174 | 14.836 |
| time_varying[shifted_mu].a | 0.000 | -0.166 | 5.135 | 22.364 | 25.306 | 22.364 |
| process[recruit_E].ycs_values{1975} | 0.000 | -0.118 | -0.549 | 0.700 | 0.379 | 0.700 |
| process[recruit_E].ycs_values{1976} | 0.000 | -0.154 | 0.356 | 3.343 | 3.077 | 3.343 |
| process[recruit_E].ycs_values{1977} | 0.000 | -0.128 | 0.981 | 4.536 | 4.220 | 4.536 |
| process[recruit_E].ycs_values{1978} | 0.000 | -0.131 | 1.907 | 6.727 | 5.757 | 6.727 |
| process[recruit_E].ycs_values{1979} | 0.000 | -0.107 | 1.485 | 5.471 | 4.775 | 5.471 |
| process[recruit_E].ycs_values{1980} | 0.000 | -0.073 | 1.512 | 5.110 | 4.725 | 5.110 |
| process[recruit_E].ycs_values{1981} | 0.000 | -0.072 | 1.712 | 5.727 | 4.881 | 5.727 |
| process[recruit_E].ycs_values{1982} | 0.000 | -0.055 | 1.551 | 5.049 | 4.585 | 5.049 |
| process[recruit_E].ycs_values{1983} | 0.000 | 0.013 | 1.559 | 4.918 | 4.462 | 4.918 |
| process[recruit_E].ycs_values{1984} | 0.000 | -0.022 | 1.230 | 4.053 | 3.639 | 4.053 |
| process[recruit_E].ycs_values{1985} | 0.000 | -0.009 | 1.102 | 3.621 | 3.257 | 3.621 |
| process[recruit_E].ycs_values{1986} | 0.000 | -0.022 | 0.850 | 2.771 | 2.465 | 2.771 |
| process[recruit_E].ycs_values{1987} | 0.000 | 0.035 | 0.472 | 2.535 | 2.449 | 2.535 |
| process[recruit_E].ycs_values{1988} | 0.000 | 0.032 | 0.471 | 3.555 | 3.499 | 3.555 |
| process[recruit_E].ycs_values{1989} | 0.000 | -0.040 | 0.455 | 1.030 | 0.960 | 1.030 |
| process[recruit_E].ycs_values{1990} | 0.000 | -0.009 | -0.101 | -1.045 | -1.021 | -1.045 |
| process[recruit_E].ycs_values{1991} | 0.000 | 0.135 | -0.307 | 0.872 | 1.077 | 0.872 |
| process[recruit_E].ycs_values{1992} | 0.000 | 0.260 | -0.787 | -0.087 | 0.450 | -0.087 |
| process[recruit_E].ycs_values{1993} | 0.000 | 0.016 | -0.831 | -2.874 | -2.474 | -2.874 |
| process[recruit_E].ycs_values{1994} | 0.000 | 0.123 | -0.879 | 0.850 | 1.296 | 0.850 |
| process[recruit_E].ycs_values{1995} | 0.000 | -0.002 | -0.843 | -2.057 | -1.667 | -2.057 |
| process[recruit_E].ycs_values{1996} | 0.000 | 0.008 | -0.695 | -2.589 | -2.291 | -2.589 |
| process[recruit_E].ycs_values{1997} | 0.000 | 0.049 | -0.496 | -0.996 | -0.633 | -0.996 |
| process[recruit_E].ycs_values{1998} | 0.000 | 0.061 | -0.170 | 0.381 | 0.540 | 0.381 |
| process[recruit_E].ycs_values{1999} | 0.000 | 0.000 | 0.000 | -0.700 | -0.827 | -0.700 |
| process[recruit_E].ycs_values{2000} | 0.000 | 0.057 | -0.449 | -1.092 | -0.856 | -1.092 |
| process[recruit_E].ycs_values{2001} | 0.000 | -0.007 | -0.489 | -2.547 | -2.454 | -2.547 |
| process[recruit_E].ycs_values{2002} | 0.000 | 0.191 | -0.294 | 0.453 | 0.704 | 0.453 |
| process[recruit_E].ycs_values{2003} | 0.000 | 0.031 | -0.159 | -1.298 | -1.194 | -1.298 |
| process[recruit_E].ycs_values{2004} | 0.000 | 0.043 | 0.097 | -0.731 | -0.821 | -0.731 |
| process[recruit_E].ycs_values{2005} | 0.000 | 0.021 | -0.233 | -1.781 | -1.709 | -1.781 |
| process[recruit_E].ycs_values{2006} | 0.000 | 0.046 | -0.070 | -1.230 | -1.244 | -1.230 |
| process[recruit_E].ycs_values{2007} | 0.000 | 0.014 | -0.244 | -3.651 | -3.669 | -3.651 |
| process[recruit_E].ycs_values{2008} | 0.000 | 0.184 | -0.500 | -1.239 | -0.954 | -1.239 |
| process[recruit_E].ycs_values{2009} | 0.000 | 0.007 | 0.206 | -3.755 | -3.862 | -3.755 |
| process[recruit_E].ycs_values{2010} | 0.000 | 0.032 | -1.074 | -5.755 | -5.219 | -5.755 |
| process[recruit_E].ycs_values{2011} | 0.000 | 0.028 | -0.017 | -3.294 | -3.225 | -3.294 |
| process[recruit_E].ycs_values{2012} | 0.000 | -0.030 | -0.293 | -4.256 | -4.139 | -4.256 |
| process[recruit_E].ycs_values{2013} | 0.000 | 0.002 | -0.355 | -4.424 | -4.122 | -4.424 |
| process[recruit_E].ycs_values{2014} | 0.000 | 0.049 | -0.299 | -5.737 | -5.803 | -5.737 |
| process[recruit_E].ycs_values{2015} | 0.000 | 0.470 | 2.231 | 10.661 | 9.920 | 10.661 |
| process[recruit_E].ycs_values{2016} | 0.000 | -0.044 | -0.529 | -10.667 | -10.915 | -10.667 |
| process[recruit_W].ycs_values{1975} | 0.000 | -0.007 | 0.365 | -1.470 | -2.996 | -1.470 |
| process[recruit_W].ycs_values{1976} | 0.000 | -0.013 | -0.977 | -7.730 | -3.815 | -7.730 |
| process[recruit_W].ycs_values{1977} | 0.000 | 0.030 | 2.210 | -0.264 | 2.190 | -0.264 |
| process[recruit_W].ycs_values{1978} | 0.000 | 0.048 | 2.312 | 3.437 | 2.647 | 3.437 |
| process[recruit_W].ycs_values{1979} | 0.000 | 0.067 | 1.517 | 1.586 | 1.190 | 1.586 |
| process[recruit_W].ycs_values{1980} | 0.000 | 0.023 | 1.061 | 0.547 | -0.072 | 0.547 |
| process[recruit_W].ycs_values{1981} | 0.000 | 0.027 | 0.892 | -0.059 | -0.876 | -0.059 |
| process[recruit_W].ycs_values{1982} | 0.000 | 0.047 | 0.284 | -1.412 | -1.781 | -1.412 |
| process[recruit_W].ycs_values{1983} | 0.000 | -0.076 | 0.133 | -2.453 | -2.848 | -2.453 |
| process[recruit_W].ycs_values{1984} | 0.000 | -0.125 | -0.016 | -3.335 | -3.876 | -3.335 |
| process[recruit_W].ycs_values{1985} | 0.000 | -0.103 | -0.257 | -3.597 | -4.084 | -3.597 |
| process[recruit_W].ycs_values{1986} | 0.000 | 0.055 | -0.021 | -2.717 | -2.526 | -2.717 |
| process[recruit_W].ycs_values{1987} | 0.000 | -0.039 | 0.305 | -5.554 | -5.156 | -5.554 |
| process[recruit_W].ycs_values{1988} | 0.000 | -0.099 | 0.229 | -5.053 | -4.613 | -5.053 |
| process[recruit_W].ycs_values{1989} | 0.000 | 0.003 | 0.160 | 0.275 | 0.116 | 0.275 |
| process[recruit_W].ycs_values{1990} | 0.000 | 0.037 | 0.304 | 1.425 | 0.966 | 1.425 |
| process[recruit_W].ycs_values{1991} | 0.000 | 0.009 | -0.093 | 4.120 | 4.274 | 4.120 |
| process[recruit_W].ycs_values{1992} | 0.000 | -0.021 | -0.017 | 1.550 | 1.299 | 1.550 |
| process[recruit_W].ycs_values{1993} | 0.000 | 0.011 | -0.185 | 0.602 | 0.210 | 0.602 |
| process[recruit_W].ycs_values{1994} | 0.000 | 0.023 | -0.377 | -4.121 | -4.056 | -4.121 |
| process[recruit_W].ycs_values{1995} | 0.000 | 0.054 | -0.392 | -0.619 | -0.742 | -0.619 |
| process[recruit_W].ycs_values{1996} | 0.000 | 0.028 | -0.440 | 5.003 | 4.710 | 5.003 |
| process[recruit_W].ycs_values{1997} | 0.000 | -0.147 | -0.644 | 1.158 | 0.419 | 1.158 |
| process[recruit_W].ycs_values{1998} | 0.000 | -0.099 | -1.251 | -5.292 | -5.432 | -5.292 |
| process[recruit_W].ycs_values{1999} | 0.000 | 0.000 | 0.000 | -0.575 | -0.680 | -0.575 |
| process[recruit_W].ycs_values{2000} | 0.000 | -0.118 | -0.581 | -2.362 | -2.589 | -2.362 |
| process[recruit_W].ycs_values{2001} | 0.000 | -0.037 | -0.447 | -1.720 | -1.826 | -1.720 |
| process[recruit_W].ycs_values{2002} | 0.000 | -0.029 | -0.007 | -0.561 | -0.778 | -0.561 |
| process[recruit_W].ycs_values{2003} | 0.000 | -0.039 | 0.114 | -0.819 | -1.166 | -0.819 |
| process[recruit_W].ycs_values{2004} | 0.000 | -0.045 | 0.190 | -0.657 | -1.001 | -0.657 |
| process[recruit_W].ycs_values{2005} | 0.000 | -0.017 | 0.350 | -0.304 | -0.691 | -0.304 |
| process[recruit_W].ycs_values{2006} | 0.000 | -0.015 | -0.091 | 0.841 | 0.652 | 0.841 |
| process[recruit_W].ycs_values{2007} | 0.000 | 0.026 | -0.312 | 3.093 | 3.035 | 3.093 |
| process[recruit_W].ycs_values{2008} | 0.000 | -0.081 | -0.198 | 1.601 | 1.507 | 1.601 |
| process[recruit_W].ycs_values{2009} | 0.000 | 0.024 | -0.934 | 2.419 | 2.697 | 2.419 |
| process[recruit_W].ycs_values{2010} | 0.000 | -0.055 | 0.483 | 3.742 | 3.200 | 3.742 |
| process[recruit_W].ycs_values{2011} | 0.000 | 0.041 | -0.796 | 2.429 | 2.738 | 2.429 |
| process[recruit_W].ycs_values{2012} | 0.000 | 0.076 | -0.674 | 2.205 | 2.491 | 2.205 |
| process[recruit_W].ycs_values{2013} | 0.000 | 0.052 | -0.172 | 8.905 | 9.162 | 8.905 |
| process[recruit_W].ycs_values{2014} | 0.000 | 0.081 | -0.460 | 4.622 | 4.798 | 4.622 |
| process[recruit_W].ycs_values{2015} | 0.000 | -0.098 | -0.208 | 0.782 | 0.771 | 0.782 |
| process[recruit_W].ycs_values{2016} | 0.000 | -0.044 | -0.530 | -10.668 | -10.915 | -10.668 |
| selectivity[sel_Whome].v{1} | 0.000 | 0.177 | -1.833 | 21.079 | 22.887 | 21.079 |
| selectivity[sel_Whome].v{2} | 0.000 | 0.370 | -8.027 | 36.473 | 40.967 | 36.473 |
| selectivity[sel_Whome].v{3} | 0.000 | 0.430 | -3.584 | -23.439 | -21.691 | -23.439 |
| selectivity[sel_Whome].v{4} | 0.000 | 0.340 | -4.687 | -129.079 | -130.028 | -129.079 |
| selectivity[sel_Whome].v{5} | 0.000 | 1.401 | -6.974 | -28.325 | -25.192 | -28.325 |
| selectivity[sel_Whome].v{6} | 0.000 | -1.511 | -5.938 | -18.332 | -18.035 | -18.332 |
| selectivity[sel_Whome].v{7} | 0.000 | 24.032 | 21.151 | -0.009 | -0.009 | -0.009 |
| selectivity[sel_Espmg].v{1} | 0.000 | 0.080 | -0.332 | 16.676 | 18.278 | 16.676 |
| selectivity[sel_Espmg].v{2} | 0.000 | 0.073 | -0.683 | 11.501 | 12.917 | 11.501 |
| selectivity[sel_Espmg].v{3} | 0.000 | 0.078 | -1.028 | 7.193 | 8.336 | 7.193 |
| selectivity[sel_Espmg].v{4} | 0.000 | 0.079 | -1.354 | 3.138 | 4.045 | 3.138 |
| selectivity[sel_Espmg].v{5} | 0.000 | 0.069 | -1.563 | -0.283 | 0.369 | -0.283 |
| selectivity[sel_Espmg].v{6} | 0.000 | 0.063 | -1.436 | -2.318 | -1.976 | -2.318 |
| selectivity[sel_Espmg].v{7} | 0.000 | 0.062 | -1.389 | -3.614 | -3.620 | -3.614 |
| selectivity[sel_Espmg].v{8} | 0.000 | 0.060 | 0.528 | 0.587 | -0.022 | 0.587 |
| selectivity[sel_Wspmg].v{1} | 0.000 | 0.032 | -0.553 | -15.544 | -14.795 | -15.544 |
| selectivity[sel_Wspmg].v{2} | 0.000 | -0.010 | 1.242 | -27.254 | -28.909 | -27.254 |
| selectivity[sel_Wspmg].v{3} | 0.000 | 0.008 | -0.029 | -0.370 | -0.038 | -0.370 |
| selectivity[sel_Wspmg].v{4} | 0.000 | 0.017 | 0.004 | 2.061 | 2.453 | 2.061 |
| selectivity[sel_Wspmg].v{5} | 0.000 | -0.026 | -0.092 | 0.380 | 0.669 | 0.380 |
| selectivity[sel_Wspmg].v{6} | 0.000 | 0.186 | -0.409 | -1.786 | -1.482 | -1.786 |
| selectivity[sel_Wspmg].v{7} | 0.000 | -0.449 | -1.171 | -3.344 | -3.207 | -3.344 |
| selectivity[sel_Wspmg].v{8} | 0.000 | 0.087 | 0.875 | 1.664 | 0.930 | 1.664 |
| selectivity[Enspsl].mu | 0.000 | 0.025 | 0.168 | -4.781 | -5.042 | -4.781 |
| selectivity[Enspsl].sigma_l | 0.000 | 0.032 | 0.112 | -8.346 | -8.743 | -8.346 |
| selectivity[Enspsl].sigma_r | 0.000 | -0.001 | 68.572 | 78.360 | 77.153 | 78.360 |
| selectivity[Wnspsl].mu | 0.000 | -0.021 | -0.240 | -169.987 | -172.455 | -169.987 |
| selectivity[Wnspsl].sigma_l | 0.000 | -0.011 | -2.203 | -1673.389 | -1665.128 | -1673.389 |
| selectivity[Wnspsl].sigma_r | 0.000 | -0.001 | 73.242 | 97.992 | 97.991 | 97.992 |
| selectivity[Espsl].mu | 0.000 | 0.018 | 3.357 | 6.713 | 5.591 | 6.713 |
| selectivity[Espsl].sigma_l | 0.000 | 0.074 | -7.454 | -359.482 | -359.372 | -359.482 |
| selectivity[Espsl].sigma_r | 0.000 | -0.071 | 1.108 | 5.524 | 5.922 | 5.524 |
| selectivity[CRsl].mu | 0.000 | 0.000 | 0.000 | -0.199 | -0.235 | -0.199 |
| selectivity[CRsl].sigma_l | 0.000 | -0.002 | 1.071 | -7.452 | -7.447 | -7.452 |
| selectivity[CRsl].sigma_r | 0.000 | 0.050 | 7.851 | 16.447 | 15.088 | 16.447 |
| selectivity[SAsl].mu | 0.000 | 0.024 | 4.144 | 12.251 | 2.456 | 12.251 |
| selectivity[SAsl].sigma_l | 0.000 | 0.021 | -0.701 | -22.288 | -34.588 | -22.288 |
| selectivity[SAsl].sigma_r | 0.000 | 0.000 | -31.519 | -104.148 | -1.795 | -104.148 |
| Component | Base_Model | Sensitivity_1 |
|---|---|---|
| CRsumbio | -31.030 | -31.030 |
| CSacous | -9.835 | -9.836 |
| SAautbio | -3.984 | -3.984 |
| SAsumbio | -6.146 | -6.146 |
| WCacous | -5.916 | -5.916 |
| CRsumage | 323.800 | 323.800 |
| SAautage | 35.120 | 35.120 |
| SAsumage | 221.100 | 221.100 |
| EnspOLF | 24.280 | 24.280 |
| Enspage | 256.100 | 256.100 |
| Espage | 581.500 | 581.500 |
| WnspOLF | 70.250 | 70.250 |
| Wnspage | 157.000 | 157.000 |
| Wspage | 364.800 | 364.800 |
| pspawn | -13.130 | -13.130 |
| pspawn_1993 | -6.015 | -6.015 |
| prior_on_q[CSacous].q | -0.839 | -0.839 |
| prior_on_q[WCacous].q | -1.202 | -1.202 |
| prior_on_q[CRsum].q | -2.207 | -2.207 |
| prior_on_q[SAsum].q | -1.557 | -1.557 |
| prior_on_q[SAaut].q | -1.762 | -1.762 |
| prior_on_relative_abundance[CRsumbio].cv_process_error | 0.000 | 0.000 |
| prior_on_relative_abundance[SAsumbio].cv_process_error | 0.000 | 0.000 |
| prior_on_log_B0_total | 0.000 | 0.000 |
| prior_on_B0_prop_stock1 | 12.560 | 12.560 |
| prior_on_natural_mortality.all | -1.217 | -1.217 |
| prior_on_selectivity[Wspsl].shift_a | 0.378 | 0.378 |
| prior_on_recruitment[E].YCS | -13.750 | -13.750 |
| prior_on_recruitment[W].YCS | -1.785 | -1.785 |
| prior_on_migration[Whome].rates_all | 0.000 | 0.000 |
| prior_on_migration[Espmg].rates_all | 0.000 | 0.000 |
| prior_on_migration[Wspmg].rates_all | 0.000 | 0.000 |
| prior_on_selectivity[Enspsl].all | 0.000 | 0.000 |
| prior_on_selectivity[Wnspsl].all | 0.000 | 0.000 |
| prior_on_selectivity[Espsl].all | 0.000 | 0.000 |
| prior_on_selectivity[CRsl].all | 0.000 | 0.000 |
| prior_on_selectivity[SAsl].all | 0.000 | 0.000 |
| Umax_Ensp1 | 0.000 | 0.000 |
| Umax_Ensp2 | 0.000 | 0.000 |
| Umax_Wnsp1 | 0.000 | 0.000 |
| Umax_Wnsp2 | 0.000 | 0.000 |
| Umax_Esp | 0.000 | 0.000 |
| Umax_Wsp | 0.000 | 0.000 |
| YCS.eq.16 | 0.000 | 0.000 |
| sp.migr | 0.013 | 0.013 |
| Total | 1947.000 | 1947.000 |
| rownames | betadiff_casal_flags_on | betadiff_casal_flags_off | betadiff_casal_flags_on_low_tol | adolc_casal_flags_on | adolc_casal_flags_off | adolc_casal_flags_on_low_tol |
|---|---|---|---|---|---|---|
| observation->CSacousbio-1991 | 2.342 | 2.344 | 2.404 | 2.387 | 2.366 | 2.387 |
| observation->CSacousbio-1993 | -0.577 | -0.577 | -0.588 | -0.593 | -0.589 | -0.593 |
| observation->CSacousbio-1994 | -0.016 | -0.016 | -0.030 | -0.048 | -0.044 | -0.048 |
| observation->CSacousbio-1995 | -0.562 | -0.562 | -0.567 | -0.572 | -0.572 | -0.572 |
| observation->CSacousbio-1996 | -0.026 | -0.027 | 0.013 | 0.072 | 0.062 | 0.072 |
| observation->CSacousbio-1997 | -0.912 | -0.912 | -0.899 | -0.880 | -0.885 | -0.880 |
| observation->CSacousbio-1998 | -0.054 | -0.055 | -0.004 | 0.056 | 0.039 | 0.056 |
| observation->CSacousbio-1999 | -1.025 | -1.025 | -1.012 | -0.992 | -0.998 | -0.992 |
| observation->CSacousbio-2001 | -1.217 | -1.217 | -1.211 | -1.203 | -1.206 | -1.203 |
| observation->CSacousbio-2002 | -0.297 | -0.297 | -0.338 | -0.409 | -0.397 | -0.409 |
| observation->CSacousbio-2003 | -0.845 | -0.845 | -0.863 | -0.897 | -0.891 | -0.897 |
| observation->CSacousbio-2005 | -0.929 | -0.929 | -0.927 | -0.916 | -0.918 | -0.916 |
| observation->CSacousbio-2006 | -0.939 | -0.939 | -0.950 | -0.971 | -0.970 | -0.971 |
| observation->CSacousbio-2007 | -0.623 | -0.623 | -0.600 | -0.542 | -0.546 | -0.542 |
| observation->CSacousbio-2008 | -1.094 | -1.094 | -1.125 | -1.181 | -1.177 | -1.181 |
| observation->CSacousbio-2009 | -0.185 | -0.186 | -0.110 | 0.072 | 0.052 | 0.072 |
| observation->CSacousbio-2011 | -1.021 | -1.021 | -1.000 | -0.956 | -0.964 | -0.956 |
| observation->CSacousbio-2013 | -0.892 | -0.892 | -0.855 | -0.826 | -0.843 | -0.826 |
| observation->CSacousbio-2015 | -0.190 | -0.191 | -0.150 | -0.177 | -0.198 | -0.177 |
| observation->CSacousbio-2017 | -1.020 | -1.020 | -1.021 | -0.990 | -0.987 | -0.990 |
| observation->WCacousbio-1988 | -0.588 | -0.588 | -0.588 | -0.589 | -0.589 | -0.589 |
| observation->WCacousbio-1989 | -0.183 | -0.184 | -0.168 | -0.064 | -0.078 | -0.064 |
| observation->WCacousbio-1990 | -0.332 | -0.331 | -0.327 | -0.258 | -0.270 | -0.258 |
| observation->WCacousbio-1991 | -0.425 | -0.425 | -0.425 | -0.425 | -0.425 | -0.425 |
| observation->WCacousbio-1992 | -0.744 | -0.744 | -0.744 | -0.727 | -0.729 | -0.727 |
| observation->WCacousbio-1993 | -0.369 | -0.371 | -0.374 | -0.496 | -0.485 | -0.496 |
| observation->WCacousbio-1997 | -0.054 | -0.055 | -0.043 | -0.012 | -0.008 | -0.012 |
| observation->WCacousbio-2000 | -1.265 | -1.264 | -1.272 | -1.279 | -1.277 | -1.279 |
| observation->WCacousbio-2012 | -0.906 | -0.906 | -0.896 | -0.792 | -0.799 | -0.792 |
| observation->WCacousbio-2013 | -1.079 | -1.079 | -1.079 | -1.066 | -1.067 | -1.066 |
| observation->CRsumbio-1992 | -1.634 | -1.634 | -1.647 | -1.535 | -1.532 | -1.535 |
| observation->CRsumbio-1993 | 0.040 | 0.041 | 0.043 | 0.376 | 0.394 | 0.376 |
| observation->CRsumbio-1994 | -1.760 | -1.761 | -1.760 | -1.726 | -1.722 | -1.726 |
| observation->CRsumbio-1995 | -1.425 | -1.431 | -1.406 | -1.328 | -1.341 | -1.328 |
| observation->CRsumbio-1996 | -1.690 | -1.691 | -1.699 | -1.708 | -1.705 | -1.708 |
| observation->CRsumbio-1997 | -0.607 | -0.609 | -0.635 | -0.824 | -0.822 | -0.824 |
| observation->CRsumbio-1998 | -1.203 | -1.205 | -1.210 | -1.065 | -1.059 | -1.065 |
| observation->CRsumbio-1999 | -0.953 | -0.950 | -0.919 | -0.804 | -0.822 | -0.804 |
| observation->CRsumbio-2000 | -1.629 | -1.629 | -1.632 | -1.635 | -1.633 | -1.635 |
| observation->CRsumbio-2001 | -1.773 | -1.773 | -1.775 | -1.730 | -1.728 | -1.730 |
| observation->CRsumbio-2002 | -1.209 | -1.205 | -1.206 | -1.099 | -1.098 | -1.099 |
| observation->CRsumbio-2003 | -1.749 | -1.748 | -1.744 | -1.725 | -1.724 | -1.725 |
| observation->CRsumbio-2004 | -0.818 | -0.821 | -0.803 | -0.845 | -0.853 | -0.845 |
| observation->CRsumbio-2005 | -1.471 | -1.470 | -1.477 | -1.460 | -1.458 | -1.460 |
| observation->CRsumbio-2006 | -1.314 | -1.314 | -1.306 | -1.447 | -1.452 | -1.447 |
| observation->CRsumbio-2007 | -0.727 | -0.726 | -0.756 | -0.665 | -0.644 | -0.665 |
| observation->CRsumbio-2008 | -0.373 | -0.376 | -0.402 | -0.451 | -0.438 | -0.451 |
| observation->CRsumbio-2009 | -0.586 | -0.587 | -0.559 | -0.599 | -0.615 | -0.599 |
| observation->CRsumbio-2010 | -1.349 | -1.350 | -1.359 | -1.319 | -1.314 | -1.319 |
| observation->CRsumbio-2011 | -1.096 | -1.094 | -1.105 | -1.100 | -1.094 | -1.100 |
| observation->CRsumbio-2012 | -1.439 | -1.438 | -1.448 | -1.376 | -1.368 | -1.376 |
| observation->CRsumbio-2013 | -1.494 | -1.494 | -1.491 | -1.433 | -1.433 | -1.433 |
| observation->CRsumbio-2014 | -1.768 | -1.768 | -1.770 | -1.726 | -1.724 | -1.726 |
| observation->CRsumbio-2016 | -1.410 | -1.411 | -1.411 | -1.286 | -1.280 | -1.286 |
| observation->CRsumbio-2018 | -1.552 | -1.552 | -1.554 | -1.488 | -1.486 | -1.488 |
| observation->SAsumbio-1992 | -0.597 | -0.596 | -0.588 | -0.695 | -0.692 | -0.695 |
| observation->SAsumbio-1993 | -0.314 | -0.314 | -0.309 | -0.488 | -0.476 | -0.488 |
| observation->SAsumbio-1994 | 0.196 | 0.194 | 0.186 | -0.001 | 0.028 | -0.001 |
| observation->SAsumbio-2001 | -0.835 | -0.834 | -0.822 | -0.869 | -0.866 | -0.869 |
| observation->SAsumbio-2002 | -0.794 | -0.794 | -0.777 | -0.818 | -0.823 | -0.818 |
| observation->SAsumbio-2003 | -0.837 | -0.836 | -0.825 | -0.858 | -0.867 | -0.858 |
| observation->SAsumbio-2004 | 0.732 | 0.735 | 0.734 | 0.762 | 0.749 | 0.762 |
| observation->SAsumbio-2005 | -0.258 | -0.255 | -0.218 | -0.184 | -0.227 | -0.184 |
| observation->SAsumbio-2006 | -0.600 | -0.598 | -0.558 | -0.602 | -0.616 | -0.602 |
| observation->SAsumbio-2007 | 0.636 | 0.637 | 0.654 | 0.747 | 0.810 | 0.747 |
| observation->SAsumbio-2008 | -0.461 | -0.463 | -0.462 | -0.497 | -0.519 | -0.497 |
| observation->SAsumbio-2009 | -0.585 | -0.584 | -0.583 | -0.636 | -0.639 | -0.636 |
| observation->SAsumbio-2010 | -0.143 | -0.146 | -0.147 | -0.152 | -0.154 | -0.152 |
| observation->SAsumbio-2012 | -0.848 | -0.848 | -0.835 | -0.876 | -0.880 | -0.876 |
| observation->SAsumbio-2013 | -0.797 | -0.796 | -0.786 | -0.824 | -0.820 | -0.824 |
| observation->SAsumbio-2015 | -0.200 | -0.201 | -0.189 | -0.254 | -0.280 | -0.254 |
| observation->SAsumbio-2017 | -0.638 | -0.638 | -0.620 | -0.693 | -0.701 | -0.693 |
| observation->SAautbio-1992 | -1.459 | -1.460 | -1.450 | -1.356 | -1.357 | -1.356 |
| observation->SAautbio-1996 | -1.233 | -1.232 | -1.250 | -1.271 | -1.256 | -1.271 |
| observation->SAautbio-1998 | -1.308 | -1.306 | -1.284 | -1.279 | -1.287 | -1.279 |
| observation->Espage-1988 | 19.793 | 19.790 | 19.640 | 19.467 | 19.507 | 19.467 |
| observation->Espage-1989 | 15.858 | 15.857 | 15.862 | 15.870 | 15.865 | 15.870 |
| observation->Espage-1990 | 21.488 | 21.486 | 21.446 | 21.379 | 21.382 | 21.379 |
| observation->Espage-1991 | 20.641 | 20.640 | 20.612 | 20.516 | 20.521 | 20.516 |
| observation->Espage-1992 | 24.089 | 24.092 | 24.020 | 23.899 | 23.918 | 23.899 |
| observation->Espage-1993 | 19.305 | 19.304 | 19.328 | 19.459 | 19.449 | 19.459 |
| observation->Espage-1994 | 20.528 | 20.522 | 20.503 | 20.449 | 20.452 | 20.449 |
| observation->Espage-1995 | 22.541 | 22.530 | 22.559 | 22.538 | 22.526 | 22.538 |
| observation->Espage-1996 | 18.590 | 18.590 | 18.577 | 18.571 | 18.574 | 18.571 |
| observation->Espage-1997 | 20.974 | 20.978 | 20.964 | 20.877 | 20.875 | 20.877 |
| observation->Espage-1998 | 20.587 | 20.579 | 20.611 | 20.541 | 20.532 | 20.541 |
| observation->Espage-1999 | 22.886 | 22.875 | 22.862 | 22.668 | 22.671 | 22.668 |
| observation->Espage-2000 | 23.321 | 23.321 | 23.314 | 23.408 | 23.422 | 23.408 |
| observation->Espage-2001 | 20.735 | 20.735 | 20.773 | 20.805 | 20.800 | 20.805 |
| observation->Espage-2002 | 26.248 | 26.243 | 26.287 | 26.208 | 26.188 | 26.208 |
| observation->Espage-2003 | 19.120 | 19.118 | 19.120 | 19.078 | 19.080 | 19.078 |
| observation->Espage-2004 | 22.692 | 22.698 | 22.642 | 22.586 | 22.583 | 22.586 |
| observation->Espage-2005 | 26.122 | 26.120 | 26.070 | 25.971 | 25.959 | 25.971 |
| observation->Espage-2006 | 23.242 | 23.245 | 23.149 | 23.067 | 23.097 | 23.067 |
| observation->Espage-2007 | 25.274 | 25.277 | 25.210 | 25.155 | 25.157 | 25.155 |
| observation->Espage-2008 | 22.167 | 22.166 | 22.129 | 22.083 | 22.089 | 22.083 |
| observation->Espage-2009 | 18.691 | 18.691 | 18.690 | 18.676 | 18.674 | 18.676 |
| observation->Espage-2010 | 21.855 | 21.856 | 21.851 | 21.786 | 21.785 | 21.786 |
| observation->Espage-2014 | 20.616 | 20.614 | 20.648 | 20.624 | 20.607 | 20.624 |
| observation->Espage-2015 | 21.823 | 21.820 | 21.870 | 21.920 | 21.907 | 21.920 |
| observation->Espage-2016 | 21.204 | 21.203 | 21.204 | 21.208 | 21.209 | 21.208 |
| observation->Espage-2017 | 21.575 | 21.578 | 21.563 | 21.581 | 21.584 | 21.581 |
| observation->Wspage-1988 | 15.724 | 15.729 | 15.753 | 16.102 | 16.221 | 16.102 |
| observation->Wspage-1989 | 11.555 | 11.558 | 11.566 | 11.695 | 11.715 | 11.695 |
| observation->Wspage-1990 | 11.752 | 11.750 | 11.790 | 12.129 | 12.123 | 12.129 |
| observation->Wspage-1991 | 13.036 | 13.037 | 13.051 | 13.278 | 13.255 | 13.278 |
| observation->Wspage-1992 | 10.178 | 10.179 | 10.170 | 10.169 | 10.162 | 10.169 |
| observation->Wspage-1993 | 10.569 | 10.571 | 10.579 | 10.491 | 10.498 | 10.491 |
| observation->Wspage-1994 | 9.918 | 9.918 | 9.924 | 9.842 | 9.845 | 9.842 |
| observation->Wspage-1995 | 13.403 | 13.399 | 13.396 | 13.427 | 13.425 | 13.427 |
| observation->Wspage-1996 | 11.840 | 11.841 | 11.844 | 11.947 | 11.935 | 11.947 |
| observation->Wspage-1997 | 11.230 | 11.233 | 11.243 | 11.385 | 11.378 | 11.385 |
| observation->Wspage-1998 | 11.761 | 11.761 | 11.762 | 11.785 | 11.788 | 11.785 |
| observation->Wspage-1999 | 11.975 | 11.976 | 11.981 | 12.142 | 12.139 | 12.142 |
| observation->Wspage-2000 | 11.256 | 11.256 | 11.260 | 11.381 | 11.379 | 11.381 |
| observation->Wspage-2001 | 12.179 | 12.181 | 12.201 | 12.291 | 12.280 | 12.291 |
| observation->Wspage-2002 | 9.731 | 9.732 | 9.745 | 9.804 | 9.800 | 9.804 |
| observation->Wspage-2003 | 9.555 | 9.555 | 9.556 | 9.586 | 9.588 | 9.586 |
| observation->Wspage-2004 | 14.340 | 14.342 | 14.304 | 14.271 | 14.284 | 14.271 |
| observation->Wspage-2005 | 14.932 | 14.934 | 14.977 | 15.121 | 15.125 | 15.121 |
| observation->Wspage-2006 | 13.817 | 13.817 | 13.872 | 14.088 | 14.103 | 14.088 |
| observation->Wspage-2007 | 11.498 | 11.500 | 11.516 | 11.530 | 11.531 | 11.530 |
| observation->Wspage-2008 | 12.195 | 12.196 | 12.194 | 12.011 | 11.988 | 12.011 |
| observation->Wspage-2009 | 12.631 | 12.635 | 12.594 | 12.242 | 12.209 | 12.242 |
| observation->Wspage-2010 | 11.316 | 11.317 | 11.299 | 11.220 | 11.209 | 11.220 |
| observation->Wspage-2011 | 11.154 | 11.155 | 11.137 | 11.093 | 11.091 | 11.093 |
| observation->Wspage-2012 | 11.867 | 11.866 | 11.860 | 11.851 | 11.847 | 11.851 |
| observation->Wspage-2013 | 11.041 | 11.043 | 11.065 | 11.081 | 11.070 | 11.081 |
| observation->Wspage-2014 | 12.944 | 12.944 | 12.941 | 12.937 | 12.936 | 12.937 |
| observation->Wspage-2015 | 13.134 | 13.136 | 13.101 | 13.009 | 13.012 | 13.009 |
| observation->Wspage-2016 | 14.272 | 14.268 | 14.273 | 14.324 | 14.331 | 14.324 |
| observation->Wspage-2017 | 13.745 | 13.746 | 13.797 | 14.070 | 14.065 | 14.070 |
| observation->EnspOLF-1992 | 4.397 | 4.396 | 4.388 | 4.303 | 4.295 | 4.303 |
| observation->EnspOLF-1994 | 6.647 | 6.645 | 6.678 | 6.645 | 6.645 | 6.645 |
| observation->EnspOLF-1996 | 7.897 | 7.899 | 7.906 | 7.760 | 7.746 | 7.760 |
| observation->EnspOLF-1998 | 5.301 | 5.301 | 5.303 | 5.205 | 5.205 | 5.205 |
| observation->Enspage-1999 | 14.332 | 14.331 | 14.287 | 14.428 | 14.455 | 14.428 |
| observation->Enspage-2000 | 13.975 | 13.973 | 13.960 | 14.044 | 14.049 | 14.044 |
| observation->Enspage-2001 | 13.979 | 13.959 | 13.929 | 13.860 | 13.865 | 13.860 |
| observation->Enspage-2002 | 12.081 | 12.087 | 12.078 | 12.008 | 12.001 | 12.008 |
| observation->Enspage-2003 | 9.700 | 9.702 | 9.706 | 9.721 | 9.722 | 9.721 |
| observation->Enspage-2004 | 12.966 | 12.972 | 12.986 | 12.793 | 12.793 | 12.793 |
| observation->Enspage-2005 | 11.012 | 11.009 | 11.009 | 10.956 | 10.964 | 10.956 |
| observation->Enspage-2006 | 12.741 | 12.744 | 12.712 | 12.878 | 12.889 | 12.878 |
| observation->Enspage-2007 | 11.061 | 11.060 | 11.052 | 11.112 | 11.107 | 11.112 |
| observation->Enspage-2008 | 12.104 | 12.100 | 12.101 | 12.194 | 12.190 | 12.194 |
| observation->Enspage-2009 | 10.056 | 10.055 | 10.055 | 10.043 | 10.051 | 10.043 |
| observation->Enspage-2010 | 17.581 | 17.576 | 17.627 | 17.534 | 17.539 | 17.534 |
| observation->Enspage-2011 | 13.399 | 13.402 | 13.412 | 13.324 | 13.312 | 13.324 |
| observation->Enspage-2012 | 13.149 | 13.148 | 13.134 | 13.023 | 13.012 | 13.023 |
| observation->Enspage-2013 | 16.694 | 16.691 | 16.659 | 16.738 | 16.734 | 16.738 |
| observation->Enspage-2014 | 13.869 | 13.868 | 13.870 | 13.898 | 13.914 | 13.898 |
| observation->Enspage-2015 | 12.760 | 12.764 | 12.776 | 12.803 | 12.792 | 12.803 |
| observation->Enspage-2016 | 19.224 | 19.222 | 19.203 | 19.276 | 19.303 | 19.276 |
| observation->Enspage-2017 | 15.562 | 15.552 | 15.511 | 15.570 | 15.597 | 15.570 |
| observation->WnspOLF-1992 | 10.122 | 10.124 | 10.129 | 11.389 | 11.330 | 11.389 |
| observation->WnspOLF-1993 | 9.045 | 9.047 | 8.991 | 9.969 | 9.952 | 9.969 |
| observation->WnspOLF-1994 | 15.930 | 15.931 | 15.893 | 19.185 | 19.111 | 19.185 |
| observation->WnspOLF-1996 | 9.788 | 9.784 | 9.752 | 8.988 | 8.931 | 8.988 |
| observation->WnspOLF-1999 | 11.553 | 11.553 | 11.593 | 10.813 | 10.867 | 10.813 |
| observation->WnspOLF-2000 | 13.812 | 13.817 | 13.892 | 14.037 | 14.079 | 14.037 |
| observation->Wnspage-2001 | 8.032 | 8.036 | 7.994 | 8.356 | 8.344 | 8.356 |
| observation->Wnspage-2002 | 8.715 | 8.714 | 8.701 | 8.580 | 8.601 | 8.580 |
| observation->Wnspage-2003 | 10.473 | 10.473 | 10.507 | 10.572 | 10.612 | 10.572 |
| observation->Wnspage-2004 | 7.155 | 7.154 | 7.140 | 7.046 | 7.064 | 7.046 |
| observation->Wnspage-2006 | 9.589 | 9.590 | 9.551 | 10.045 | 9.995 | 10.045 |
| observation->Wnspage-2007 | 10.861 | 10.860 | 10.822 | 11.414 | 11.400 | 11.414 |
| observation->Wnspage-2008 | 12.425 | 12.422 | 12.435 | 12.944 | 12.944 | 12.944 |
| observation->Wnspage-2009 | 14.716 | 14.719 | 14.790 | 14.123 | 14.160 | 14.123 |
| observation->Wnspage-2010 | 11.405 | 11.405 | 11.370 | 11.468 | 11.467 | 11.468 |
| observation->Wnspage-2011 | 11.267 | 11.265 | 11.275 | 11.096 | 11.095 | 11.096 |
| observation->Wnspage-2012 | 10.454 | 10.453 | 10.465 | 10.789 | 10.779 | 10.789 |
| observation->Wnspage-2013 | 13.633 | 13.634 | 13.634 | 13.710 | 13.688 | 13.710 |
| observation->Wnspage-2014 | 12.608 | 12.609 | 12.597 | 11.228 | 11.240 | 11.228 |
| observation->Wnspage-2016 | 15.687 | 15.683 | 15.722 | 14.861 | 14.887 | 14.861 |
| observation->CRsumage-1992 | 15.584 | 15.570 | 15.566 | 14.743 | 14.734 | 14.743 |
| observation->CRsumage-1993 | 10.616 | 10.613 | 10.624 | 10.560 | 10.552 | 10.560 |
| observation->CRsumage-1994 | 18.170 | 18.174 | 18.130 | 17.550 | 17.549 | 17.550 |
| observation->CRsumage-1995 | 14.285 | 14.287 | 14.242 | 13.645 | 13.652 | 13.645 |
| observation->CRsumage-1996 | 11.567 | 11.566 | 11.607 | 11.103 | 11.092 | 11.103 |
| observation->CRsumage-1997 | 15.754 | 15.750 | 15.688 | 15.391 | 15.412 | 15.391 |
| observation->CRsumage-1998 | 14.690 | 14.686 | 14.690 | 13.370 | 13.348 | 13.370 |
| observation->CRsumage-1999 | 12.061 | 12.061 | 12.084 | 12.389 | 12.382 | 12.389 |
| observation->CRsumage-2000 | 14.323 | 14.326 | 14.283 | 14.692 | 14.729 | 14.692 |
| observation->CRsumage-2001 | 19.659 | 19.651 | 19.520 | 18.887 | 18.916 | 18.887 |
| observation->CRsumage-2002 | 10.969 | 10.971 | 10.960 | 11.021 | 11.022 | 11.021 |
| observation->CRsumage-2003 | 11.251 | 11.254 | 11.210 | 11.148 | 11.165 | 11.148 |
| observation->CRsumage-2004 | 9.553 | 9.556 | 9.561 | 9.114 | 9.097 | 9.114 |
| observation->CRsumage-2005 | 12.753 | 12.749 | 12.654 | 12.371 | 12.407 | 12.371 |
| observation->CRsumage-2006 | 10.316 | 10.317 | 10.317 | 11.081 | 11.112 | 11.081 |
| observation->CRsumage-2007 | 13.562 | 13.561 | 13.504 | 13.093 | 13.094 | 13.093 |
| observation->CRsumage-2008 | 11.661 | 11.665 | 11.639 | 11.736 | 11.752 | 11.736 |
| observation->CRsumage-2009 | 12.006 | 12.002 | 11.965 | 11.992 | 12.016 | 11.992 |
| observation->CRsumage-2010 | 11.048 | 11.052 | 11.055 | 11.664 | 11.691 | 11.664 |
| observation->CRsumage-2011 | 12.579 | 12.577 | 12.571 | 13.656 | 13.712 | 13.656 |
| observation->CRsumage-2012 | 17.228 | 17.230 | 17.141 | 16.226 | 16.262 | 16.226 |
| observation->CRsumage-2013 | 11.843 | 11.845 | 11.822 | 12.725 | 12.785 | 12.725 |
| observation->CRsumage-2014 | 11.286 | 11.288 | 11.271 | 11.411 | 11.425 | 11.411 |
| observation->CRsumage-2016 | 9.866 | 9.867 | 9.847 | 10.361 | 10.401 | 10.361 |
| observation->CRsumage-2018 | 11.931 | 11.935 | 11.895 | 12.546 | 12.583 | 12.546 |
| observation->SAsumage-1992 | 12.246 | 12.241 | 12.269 | 12.083 | 12.131 | 12.083 |
| observation->SAsumage-1993 | 12.470 | 12.483 | 12.502 | 12.724 | 12.755 | 12.724 |
| observation->SAsumage-1994 | 10.811 | 10.808 | 10.818 | 10.914 | 10.928 | 10.914 |
| observation->SAsumage-2001 | 12.749 | 12.762 | 12.839 | 12.964 | 13.001 | 12.964 |
| observation->SAsumage-2002 | 12.209 | 12.216 | 12.254 | 12.339 | 12.442 | 12.339 |
| observation->SAsumage-2003 | 13.386 | 13.388 | 13.386 | 13.463 | 13.613 | 13.463 |
| observation->SAsumage-2004 | 11.067 | 11.064 | 11.005 | 11.066 | 11.103 | 11.066 |
| observation->SAsumage-2005 | 15.278 | 15.280 | 15.386 | 15.839 | 15.769 | 15.839 |
| observation->SAsumage-2006 | 14.112 | 14.110 | 14.078 | 14.295 | 14.236 | 14.295 |
| observation->SAsumage-2007 | 10.649 | 10.649 | 10.639 | 10.667 | 10.766 | 10.667 |
| observation->SAsumage-2008 | 13.771 | 13.766 | 13.836 | 14.101 | 13.934 | 14.101 |
| observation->SAsumage-2009 | 15.513 | 15.520 | 15.530 | 15.818 | 15.739 | 15.818 |
| observation->SAsumage-2010 | 15.081 | 15.082 | 15.130 | 15.667 | 15.574 | 15.667 |
| observation->SAsumage-2012 | 13.437 | 13.439 | 13.479 | 13.405 | 13.412 | 13.405 |
| observation->SAsumage-2013 | 11.954 | 11.956 | 11.982 | 12.021 | 12.023 | 12.021 |
| observation->SAsumage-2015 | 13.522 | 13.524 | 13.540 | 14.059 | 14.068 | 14.059 |
| observation->SAsumage-2017 | 12.492 | 12.487 | 12.478 | 12.560 | 12.567 | 12.560 |
| observation->SAautage-1992 | 11.809 | 11.819 | 11.857 | 12.184 | 12.219 | 12.184 |
| observation->SAautage-1996 | 10.449 | 10.450 | 10.426 | 10.583 | 10.568 | 10.583 |
| observation->SAautage-1998 | 12.809 | 12.810 | 12.835 | 12.867 | 12.902 | 12.867 |
| observation->pspawn_1993 | -6.017 | -6.016 | -6.015 | -5.898 | -5.880 | -5.898 |
| observation->pspawn-1992 | -4.848 | -4.852 | -4.829 | -4.743 | -4.800 | -4.743 |
| observation->pspawn-1998 | -8.284 | -8.291 | -8.300 | -8.249 | -8.225 | -8.249 |
| prior->CSacousq->catchability[CSacous].q | -0.849 | -0.847 | -0.839 | -0.821 | -0.822 | -0.821 |
| prior->WCacousq->catchability[WCacous].q | -1.162 | -1.163 | -1.202 | -1.282 | -1.267 | -1.282 |
| prior->CRsumq->catchability[CRsum].q | -2.155 | -2.153 | -2.207 | -2.237 | -2.228 | -2.237 |
| prior->SAsumq->catchability[SAsum].q | -1.762 | -1.760 | -1.557 | -0.874 | -1.035 | -0.874 |
| prior->SAautq->catchability[SAaut].q | -1.913 | -1.911 | -1.762 | -1.081 | -1.229 | -1.081 |
| prior->CR_process_error->observation[CRsumbio].process_error | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 |
| prior->SA_process_error->observation[SAsumbio].process_error | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 |
| prior->B0_E_with_total_log_b0_prior->process[recruit_E].b0 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 |
| prior->B0_W_with_proportion_prior->process[recruit_W].b0 | 12.544 | 12.545 | 12.555 | 12.612 | 12.597 | 12.612 |
| prior->M_all->process[Instant_mortality].m{west.sa} | -1.085 | -1.083 | -1.217 | -1.103 | -1.160 | -1.103 |
| prior->Wspsl_shift_param->time_varying[shifted_mu].a | 0.420 | 0.422 | 0.378 | 0.253 | 0.234 | 0.253 |
| prior->YCS_E->process[recruit_E].ycs_values{1975} | -0.624 | -0.624 | -0.623 | -0.626 | -0.625 | -0.626 |
| prior->YCS_E->process[recruit_E].ycs_values{1976} | -0.316 | -0.314 | -0.319 | -0.349 | -0.346 | -0.349 |
| prior->YCS_E->process[recruit_E].ycs_values{1977} | -0.227 | -0.225 | -0.238 | -0.278 | -0.274 | -0.278 |
| prior->YCS_E->process[recruit_E].ycs_values{1978} | 0.654 | 0.656 | 0.615 | 0.517 | 0.537 | 0.517 |
| prior->YCS_E->process[recruit_E].ycs_values{1979} | 0.084 | 0.086 | 0.062 | 0.002 | 0.013 | 0.002 |
| prior->YCS_E->process[recruit_E].ycs_values{1980} | -0.630 | -0.630 | -0.627 | -0.617 | -0.618 | -0.617 |
| prior->YCS_E->process[recruit_E].ycs_values{1981} | -0.619 | -0.619 | -0.623 | -0.632 | -0.631 | -0.632 |
| prior->YCS_E->process[recruit_E].ycs_values{1982} | -0.550 | -0.551 | -0.542 | -0.520 | -0.523 | -0.520 |
| prior->YCS_E->process[recruit_E].ycs_values{1983} | -0.627 | -0.627 | -0.630 | -0.636 | -0.635 | -0.636 |
| prior->YCS_E->process[recruit_E].ycs_values{1984} | -0.591 | -0.591 | -0.596 | -0.606 | -0.605 | -0.606 |
| prior->YCS_E->process[recruit_E].ycs_values{1985} | -0.641 | -0.641 | -0.642 | -0.643 | -0.643 | -0.643 |
| prior->YCS_E->process[recruit_E].ycs_values{1986} | -0.408 | -0.408 | -0.400 | -0.383 | -0.386 | -0.383 |
| prior->YCS_E->process[recruit_E].ycs_values{1987} | 0.142 | 0.142 | 0.135 | 0.103 | 0.104 | 0.103 |
| prior->YCS_E->process[recruit_E].ycs_values{1988} | 0.026 | 0.025 | 0.019 | -0.026 | -0.025 | -0.026 |
| prior->YCS_E->process[recruit_E].ycs_values{1989} | -0.631 | -0.631 | -0.632 | -0.633 | -0.633 | -0.633 |
| prior->YCS_E->process[recruit_E].ycs_values{1990} | 0.159 | 0.159 | 0.158 | 0.143 | 0.143 | 0.143 |
| prior->YCS_E->process[recruit_E].ycs_values{1991} | -0.643 | -0.643 | -0.643 | -0.643 | -0.642 | -0.643 |
| prior->YCS_E->process[recruit_E].ycs_values{1992} | -0.643 | -0.643 | -0.643 | -0.643 | -0.643 | -0.643 |
| prior->YCS_E->process[recruit_E].ycs_values{1993} | -0.643 | -0.643 | -0.643 | -0.643 | -0.643 | -0.643 |
| prior->YCS_E->process[recruit_E].ycs_values{1994} | -0.530 | -0.531 | -0.525 | -0.535 | -0.538 | -0.535 |
| prior->YCS_E->process[recruit_E].ycs_values{1995} | -0.534 | -0.534 | -0.538 | -0.545 | -0.543 | -0.545 |
| prior->YCS_E->process[recruit_E].ycs_values{1996} | -0.574 | -0.573 | -0.577 | -0.585 | -0.584 | -0.585 |
| prior->YCS_E->process[recruit_E].ycs_values{1997} | -0.623 | -0.623 | -0.622 | -0.620 | -0.621 | -0.620 |
| prior->YCS_E->process[recruit_E].ycs_values{1998} | -0.512 | -0.511 | -0.513 | -0.509 | -0.508 | -0.509 |
| prior->YCS_E->process[recruit_E].ycs_values{1999} | 2.014 | 2.014 | 2.014 | 1.994 | 1.990 | 1.994 |
| prior->YCS_E->process[recruit_E].ycs_values{2000} | -0.616 | -0.616 | -0.614 | -0.612 | -0.613 | -0.612 |
| prior->YCS_E->process[recruit_E].ycs_values{2001} | -0.065 | -0.065 | -0.071 | -0.098 | -0.097 | -0.098 |
| prior->YCS_E->process[recruit_E].ycs_values{2002} | -0.543 | -0.542 | -0.545 | -0.540 | -0.539 | -0.540 |
| prior->YCS_E->process[recruit_E].ycs_values{2003} | -0.586 | -0.586 | -0.585 | -0.581 | -0.581 | -0.581 |
| prior->YCS_E->process[recruit_E].ycs_values{2004} | -0.568 | -0.568 | -0.568 | -0.564 | -0.564 | -0.564 |
| prior->YCS_E->process[recruit_E].ycs_values{2005} | -0.579 | -0.579 | -0.578 | -0.571 | -0.571 | -0.571 |
| prior->YCS_E->process[recruit_E].ycs_values{2006} | -0.483 | -0.483 | -0.482 | -0.474 | -0.474 | -0.474 |
| prior->YCS_E->process[recruit_E].ycs_values{2007} | -0.567 | -0.567 | -0.566 | -0.549 | -0.549 | -0.549 |
| prior->YCS_E->process[recruit_E].ycs_values{2008} | -0.643 | -0.643 | -0.643 | -0.643 | -0.643 | -0.643 |
| prior->YCS_E->process[recruit_E].ycs_values{2009} | -0.561 | -0.561 | -0.562 | -0.541 | -0.540 | -0.541 |
| prior->YCS_E->process[recruit_E].ycs_values{2010} | -0.031 | -0.031 | -0.046 | -0.106 | -0.100 | -0.106 |
| prior->YCS_E->process[recruit_E].ycs_values{2011} | -0.408 | -0.408 | -0.408 | -0.380 | -0.380 | -0.380 |
| prior->YCS_E->process[recruit_E].ycs_values{2012} | -0.019 | -0.019 | -0.023 | -0.076 | -0.074 | -0.076 |
| prior->YCS_E->process[recruit_E].ycs_values{2013} | -0.238 | -0.238 | -0.242 | -0.285 | -0.282 | -0.285 |
| prior->YCS_E->process[recruit_E].ycs_values{2014} | -0.317 | -0.317 | -0.314 | -0.258 | -0.258 | -0.258 |
| prior->YCS_E->process[recruit_E].ycs_values{2015} | -0.279 | -0.284 | -0.302 | -0.389 | -0.381 | -0.389 |
| prior->YCS_E->process[recruit_E].ycs_values{2016} | 0.363 | 0.364 | 0.373 | 0.550 | 0.555 | 0.550 |
| prior->YCS_W->process[recruit_W].ycs_values{1975} | -0.616 | -0.616 | -0.617 | -0.612 | -0.607 | -0.612 |
| prior->YCS_W->process[recruit_W].ycs_values{1976} | -0.195 | -0.195 | -0.184 | -0.103 | -0.150 | -0.103 |
| prior->YCS_W->process[recruit_W].ycs_values{1977} | -0.376 | -0.376 | -0.396 | -0.373 | -0.395 | -0.373 |
| prior->YCS_W->process[recruit_W].ycs_values{1978} | -0.396 | -0.397 | -0.417 | -0.426 | -0.419 | -0.426 |
| prior->YCS_W->process[recruit_W].ycs_values{1979} | -0.607 | -0.607 | -0.612 | -0.612 | -0.611 | -0.612 |
| prior->YCS_W->process[recruit_W].ycs_values{1980} | -0.567 | -0.568 | -0.573 | -0.570 | -0.567 | -0.570 |
| prior->YCS_W->process[recruit_W].ycs_values{1981} | -0.502 | -0.502 | -0.508 | -0.502 | -0.496 | -0.502 |
| prior->YCS_W->process[recruit_W].ycs_values{1982} | -0.606 | -0.606 | -0.607 | -0.601 | -0.599 | -0.601 |
| prior->YCS_W->process[recruit_W].ycs_values{1983} | -0.109 | -0.108 | -0.111 | -0.077 | -0.072 | -0.077 |
| prior->YCS_W->process[recruit_W].ycs_values{1984} | -0.163 | -0.161 | -0.163 | -0.122 | -0.115 | -0.122 |
| prior->YCS_W->process[recruit_W].ycs_values{1985} | -0.619 | -0.619 | -0.620 | -0.628 | -0.629 | -0.628 |
| prior->YCS_W->process[recruit_W].ycs_values{1986} | -0.098 | -0.097 | -0.098 | -0.132 | -0.130 | -0.132 |
| prior->YCS_W->process[recruit_W].ycs_values{1987} | 0.788 | 0.789 | 0.782 | 0.904 | 0.896 | 0.904 |
| prior->YCS_W->process[recruit_W].ycs_values{1988} | -0.252 | -0.251 | -0.255 | -0.196 | -0.201 | -0.196 |
| prior->YCS_W->process[recruit_W].ycs_values{1989} | 1.207 | 1.207 | 1.211 | 1.214 | 1.210 | 1.214 |
| prior->YCS_W->process[recruit_W].ycs_values{1990} | 1.197 | 1.198 | 1.204 | 1.231 | 1.220 | 1.231 |
| prior->YCS_W->process[recruit_W].ycs_values{1991} | -0.081 | -0.081 | -0.080 | -0.135 | -0.137 | -0.135 |
| prior->YCS_W->process[recruit_W].ycs_values{1992} | 0.480 | 0.480 | 0.480 | 0.451 | 0.455 | 0.451 |
| prior->YCS_W->process[recruit_W].ycs_values{1993} | -0.643 | -0.643 | -0.643 | -0.643 | -0.643 | -0.643 |
| prior->YCS_W->process[recruit_W].ycs_values{1994} | 0.014 | 0.014 | 0.020 | 0.073 | 0.072 | 0.073 |
| prior->YCS_W->process[recruit_W].ycs_values{1995} | -0.410 | -0.409 | -0.413 | -0.415 | -0.416 | -0.415 |
| prior->YCS_W->process[recruit_W].ycs_values{1996} | -0.301 | -0.301 | -0.306 | -0.246 | -0.250 | -0.246 |
| prior->YCS_W->process[recruit_W].ycs_values{1997} | -0.466 | -0.467 | -0.471 | -0.457 | -0.463 | -0.457 |
| prior->YCS_W->process[recruit_W].ycs_values{1998} | -0.322 | -0.323 | -0.334 | -0.372 | -0.373 | -0.372 |
| prior->YCS_W->process[recruit_W].ycs_values{1999} | 2.014 | 2.014 | 2.014 | 1.997 | 1.994 | 1.997 |
| prior->YCS_W->process[recruit_W].ycs_values{2000} | -0.643 | -0.643 | -0.643 | -0.643 | -0.643 | -0.643 |
| prior->YCS_W->process[recruit_W].ycs_values{2001} | 0.856 | 0.855 | 0.846 | 0.819 | 0.817 | 0.819 |
| prior->YCS_W->process[recruit_W].ycs_values{2002} | -0.222 | -0.222 | -0.222 | -0.216 | -0.213 | -0.216 |
| prior->YCS_W->process[recruit_W].ycs_values{2003} | -0.612 | -0.612 | -0.612 | -0.609 | -0.608 | -0.609 |
| prior->YCS_W->process[recruit_W].ycs_values{2004} | -0.570 | -0.570 | -0.571 | -0.567 | -0.565 | -0.567 |
| prior->YCS_W->process[recruit_W].ycs_values{2005} | -0.574 | -0.574 | -0.576 | -0.573 | -0.571 | -0.573 |
| prior->YCS_W->process[recruit_W].ycs_values{2006} | -0.280 | -0.280 | -0.279 | -0.289 | -0.287 | -0.289 |
| prior->YCS_W->process[recruit_W].ycs_values{2007} | -0.438 | -0.438 | -0.436 | -0.462 | -0.462 | -0.462 |
| prior->YCS_W->process[recruit_W].ycs_values{2008} | -0.464 | -0.464 | -0.463 | -0.476 | -0.475 | -0.476 |
| prior->YCS_W->process[recruit_W].ycs_values{2009} | -0.514 | -0.514 | -0.508 | -0.529 | -0.531 | -0.529 |
| prior->YCS_W->process[recruit_W].ycs_values{2010} | 0.071 | 0.070 | 0.078 | 0.129 | 0.120 | 0.129 |
| prior->YCS_W->process[recruit_W].ycs_values{2011} | 0.031 | 0.030 | 0.043 | -0.004 | -0.009 | -0.004 |
| prior->YCS_W->process[recruit_W].ycs_values{2012} | -0.050 | -0.049 | -0.059 | -0.019 | -0.015 | -0.019 |
| prior->YCS_W->process[recruit_W].ycs_values{2013} | -0.489 | -0.488 | -0.490 | -0.417 | -0.415 | -0.417 |
| prior->YCS_W->process[recruit_W].ycs_values{2014} | 1.730 | 1.727 | 1.742 | 1.603 | 1.598 | 1.603 |
| prior->YCS_W->process[recruit_W].ycs_values{2015} | 1.681 | 1.684 | 1.687 | 1.660 | 1.660 | 1.660 |
| prior->YCS_W->process[recruit_W].ycs_values{2016} | 0.363 | 0.364 | 0.373 | 0.551 | 0.555 | 0.551 |
| prior->sel_Whome->selectivity[sel_Whome].v{1} | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 |
| prior->sel_Whome->selectivity[sel_Whome].v{2} | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 |
| prior->sel_Whome->selectivity[sel_Whome].v{3} | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 |
| prior->sel_Whome->selectivity[sel_Whome].v{4} | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 |
| prior->sel_Whome->selectivity[sel_Whome].v{5} | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 |
| prior->sel_Whome->selectivity[sel_Whome].v{6} | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 |
| prior->sel_Whome->selectivity[sel_Whome].v{7} | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 |
| prior->sel_Espmg_male->selectivity[sel_Espmg].v{1} | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 |
| prior->sel_Espmg_male->selectivity[sel_Espmg].v{2} | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 |
| prior->sel_Espmg_male->selectivity[sel_Espmg].v{3} | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 |
| prior->sel_Espmg_male->selectivity[sel_Espmg].v{4} | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 |
| prior->sel_Espmg_male->selectivity[sel_Espmg].v{5} | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 |
| prior->sel_Espmg_male->selectivity[sel_Espmg].v{6} | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 |
| prior->sel_Espmg_male->selectivity[sel_Espmg].v{7} | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 |
| prior->sel_Espmg_male->selectivity[sel_Espmg].v{8} | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 |
| prior->sel_Wspmg_male->selectivity[sel_Wspmg].v{1} | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 |
| prior->sel_Wspmg_male->selectivity[sel_Wspmg].v{2} | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 |
| prior->sel_Wspmg_male->selectivity[sel_Wspmg].v{3} | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 |
| prior->sel_Wspmg_male->selectivity[sel_Wspmg].v{4} | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 |
| prior->sel_Wspmg_male->selectivity[sel_Wspmg].v{5} | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 |
| prior->sel_Wspmg_male->selectivity[sel_Wspmg].v{6} | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 |
| prior->sel_Wspmg_male->selectivity[sel_Wspmg].v{7} | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 |
| prior->sel_Wspmg_male->selectivity[sel_Wspmg].v{8} | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 |
| prior->Enspsl_mu->selectivity[Enspsl].mu | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 |
| prior->Enspsl_s_l->selectivity[Enspsl].sigma_l | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 |
| prior->Enspsl_s_r->selectivity[Enspsl].sigma_r | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 |
| prior->Wnspsl_mu->selectivity[Wnspsl].mu | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 |
| prior->Wnspsl_s_l->selectivity[Wnspsl].sigma_l | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 |
| prior->Wnspsl_s_r->selectivity[Wnspsl].sigma_r | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 |
| prior->Espsl_mu->selectivity[Espsl].mu | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 |
| prior->Espsl_s_l->selectivity[Espsl].sigma_l | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 |
| prior->Espsl_s_r->selectivity[Espsl].sigma_r | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 |
| prior->CRsl_mu->selectivity[CRsl].mu | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 |
| prior->CRsl_s_l->selectivity[CRsl].sigma_l | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 |
| prior->CRsl_s_r->selectivity[CRsl].sigma_r | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 |
| prior->SAsl_mu->selectivity[SAsl].mu | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 |
| prior->SAsl_s_l->selectivity[SAsl].sigma_l | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 |
| prior->SAsl_s_r->selectivity[SAsl].sigma_r | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 |
| additional_prior->YCS.eq.16 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 |
| additional_prior->sp.migr | 0.009 | 0.009 | 0.013 | 0.025 | 0.023 | 0.025 |
| jacobian->log_sum_b0 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 |
| total_negloglike | 1946.810 | 1946.800 | 1946.540 | 1954.580 | 1954.670 | 1954.580 |
| total_score | 1946.810 | 1946.800 | 1946.540 | 1954.580 | 1954.670 | 1954.580 |
## [1] "CASAL base model convergence information"
## [1] "fmm: have converged: t = 8.24015e-007 f = 1946.54"
## [2] "Successful convergence in optimise"
## [3] "Minimiser achieved convergence after 599 quasi-Newton iterations using 669 objective function evaluations"
## [1] ""
## [1] "CASAL sensitivity 1 model convergence information"
## [1] "fmm: step size too small. Indicates successful convergence (though this is not the textbook ideal convergence situation)"
## [2] "Successful convergence in optimise"
## [3] "Minimiser achieved convergence after 665 quasi-Newton iterations using 765 objective function evaluations"
## [1] ""
## [1] "Casal2 betadiff_casal_flags_on model convergence information"
## [1] "fmm: have converged: t = 6.55824e-07 f = 1946.81"
## [2] "Successful convergence in optimise"
## [1] ""
## [1] "Casal2 betadiff_casal_flags_off model convergence information"
## [1] "fmm: have converged: t = 5.37067e-07 f = 1946.8"
## [2] "Successful convergence in optimise"
## [1] ""
## [1] "Casal2 betadiff_casal_flags_on_low_tol model convergence information"
## [1] "fmm: step size too small. Indicates successful convergence (though this is not the textbook ideal convergence situation)"
## [2] "Successful convergence in optimise"
## [1] ""
## [1] "Casal2 adolc_casal_flags_on model convergence information"
## [1] "[IMPORTANT] FMM: Max newton steps (5)"
## [2] "FMM: Max newton steps (5)"
## [1] ""
## [1] "Casal2 adolc_casal_flags_off model convergence information"
## [1] "[IMPORTANT] FMM: Max newton steps (5)"
## [2] "FMM: Max newton steps (5)"
## [1] ""
## [1] "Casal2 adolc_casal_flags_on_low_tol model convergence information"
## [1] "[IMPORTANT] FMM: Max newton steps (5)"
## [2] "FMM: Max newton steps (5)"
## [1] "CASAL model warnings"
## parameter estimate lower.bound upper.bound
## 1 recruitment[E].YCS[25] 0.06 0.06 8.6
## 2 recruitment[W].YCS[25] 0.06 0.06 8.6
## 3 selectivity[CRsl].all[1] 1 1 17
## 4 selectivity[CRsl].all[2] 1 1 50
## [1] ""
## [1] "CASAL sensitivity 1 model warnings"
## parameter estimate lower.bound upper.bound
## 1 recruitment[E].YCS[25] 0.06 0.06 8.6
## 2 recruitment[W].YCS[25] 0.06 0.06 8.6
## 3 selectivity[CRsl].all[1] 1 1 17
## 4 selectivity[CRsl].all[2] 1 1 50
## [1] ""
## [1] "Casal2 betadiff_casal_flags_on model warnings"
## [1] "Estimates were removed because of matching lower and upper bounds. Originally had 134 estimates, now have 133"
## [2] "estimated parameter 'process[recruit_E].b0' was within 0.001 of upper bound 16.2"
## [3] "estimated parameter 'process[recruit_W].b0' was within 0.001 of upper bound 0.59"
## [4] "estimated parameter 'process[recruit_E].ycs_values{1999}' was within 0.001 of lower bound 0.06"
## [5] "estimated parameter 'process[recruit_W].ycs_values{1999}' was within 0.001 of lower bound 0.06"
## [6] "estimated parameter 'selectivity[sel_Whome].v{7}' was within 0.001 of upper bound 1"
## [7] "estimated parameter 'selectivity[Enspsl].sigma_r' was within 0.001 of upper bound 50"
## [8] "estimated parameter 'selectivity[Wnspsl].sigma_r' was within 0.001 of upper bound 50"
## [9] "estimated parameter 'selectivity[CRsl].mu' was within 0.001 of lower bound 1"
## [10] "estimated parameter 'selectivity[SAsl].sigma_r' was within 0.001 of lower bound 1"
## [11] "estimated parameter 'process[recruit_E].b0' was within 0.001 of upper bound 16.2"
## [12] "estimated parameter 'process[recruit_W].b0' was within 0.001 of upper bound 0.59"
## [13] "estimated parameter 'process[recruit_E].ycs_values{1999}' was within 0.001 of lower bound 0.06"
## [14] "estimated parameter 'process[recruit_W].ycs_values{1999}' was within 0.001 of lower bound 0.06"
## [15] "estimated parameter 'selectivity[sel_Whome].v{7}' was within 0.001 of upper bound 1"
## [16] "estimated parameter 'selectivity[Enspsl].sigma_r' was within 0.001 of upper bound 50"
## [17] "estimated parameter 'selectivity[Wnspsl].sigma_r' was within 0.001 of upper bound 50"
## [18] "estimated parameter 'selectivity[CRsl].mu' was within 0.001 of lower bound 1"
## [19] "estimated parameter 'selectivity[SAsl].sigma_r' was within 0.001 of lower bound 1"
## [1] ""
## [1] "Casal2 betadiff_casal_flags_off model warnings"
## [1] "Estimates were removed because of matching lower and upper bounds. Originally had 134 estimates, now have 133"
## [2] "estimated parameter 'process[recruit_E].b0' was within 0.001 of upper bound 16.2"
## [3] "estimated parameter 'process[recruit_W].b0' was within 0.001 of upper bound 0.59"
## [4] "estimated parameter 'process[recruit_E].ycs_values{1999}' was within 0.001 of lower bound 0.06"
## [5] "estimated parameter 'process[recruit_W].ycs_values{1999}' was within 0.001 of lower bound 0.06"
## [6] "estimated parameter 'selectivity[Enspsl].sigma_r' was within 0.001 of upper bound 50"
## [7] "estimated parameter 'selectivity[Wnspsl].sigma_r' was within 0.001 of upper bound 50"
## [8] "estimated parameter 'selectivity[CRsl].mu' was within 0.001 of lower bound 1"
## [9] "estimated parameter 'selectivity[SAsl].sigma_r' was within 0.001 of lower bound 1"
## [10] "estimated parameter 'process[recruit_E].b0' was within 0.001 of upper bound 16.2"
## [11] "estimated parameter 'process[recruit_W].b0' was within 0.001 of upper bound 0.59"
## [12] "estimated parameter 'process[recruit_E].ycs_values{1999}' was within 0.001 of lower bound 0.06"
## [13] "estimated parameter 'process[recruit_W].ycs_values{1999}' was within 0.001 of lower bound 0.06"
## [14] "estimated parameter 'selectivity[Enspsl].sigma_r' was within 0.001 of upper bound 50"
## [15] "estimated parameter 'selectivity[Wnspsl].sigma_r' was within 0.001 of upper bound 50"
## [16] "estimated parameter 'selectivity[CRsl].mu' was within 0.001 of lower bound 1"
## [17] "estimated parameter 'selectivity[SAsl].sigma_r' was within 0.001 of lower bound 1"
## [1] ""
## [1] "Casal2 betadiff_casal_flags_on_low_tol model warnings"
## [1] "Estimates were removed because of matching lower and upper bounds. Originally had 134 estimates, now have 133"
## [2] "estimated parameter 'process[recruit_E].b0' was within 0.001 of upper bound 16.2"
## [3] "estimated parameter 'process[recruit_W].b0' was within 0.001 of upper bound 0.59"
## [4] "estimated parameter 'process[recruit_E].ycs_values{1999}' was within 0.001 of lower bound 0.06"
## [5] "estimated parameter 'process[recruit_W].ycs_values{1999}' was within 0.001 of lower bound 0.06"
## [6] "estimated parameter 'selectivity[CRsl].mu' was within 0.001 of lower bound 1"
## [7] "estimated parameter 'process[recruit_E].b0' was within 0.001 of upper bound 16.2"
## [8] "estimated parameter 'process[recruit_W].b0' was within 0.001 of upper bound 0.59"
## [9] "estimated parameter 'process[recruit_E].ycs_values{1999}' was within 0.001 of lower bound 0.06"
## [10] "estimated parameter 'process[recruit_W].ycs_values{1999}' was within 0.001 of lower bound 0.06"
## [11] "estimated parameter 'selectivity[CRsl].mu' was within 0.001 of lower bound 1"
## [1] ""
## [1] "Casal2 adolc_casal_flags_on model warnings"
## [1] "Estimates were removed because of matching lower and upper bounds. Originally had 134 estimates, now have 133"
## [2] "estimated parameter 'process[recruit_E].b0' was within 0.001 of upper bound 16.2"
## [3] "estimated parameter 'process[recruit_W].b0' was within 0.001 of upper bound 0.59"
## [4] "estimated parameter 'process[recruit_E].ycs_values{1999}' was within 0.001 of lower bound 0.06"
## [5] "estimated parameter 'process[recruit_W].ycs_values{1999}' was within 0.001 of lower bound 0.06"
## [6] "estimated parameter 'selectivity[sel_Whome].v{7}' was within 0.001 of upper bound 1"
## [7] "estimated parameter 'process[recruit_E].b0' was within 0.001 of upper bound 16.2"
## [8] "estimated parameter 'process[recruit_W].b0' was within 0.001 of upper bound 0.59"
## [9] "estimated parameter 'process[recruit_E].ycs_values{1999}' was within 0.001 of lower bound 0.06"
## [10] "estimated parameter 'process[recruit_W].ycs_values{1999}' was within 0.001 of lower bound 0.06"
## [11] "estimated parameter 'selectivity[sel_Whome].v{7}' was within 0.001 of upper bound 1"
## [1] ""
## [1] "Casal2 adolc_casal_flags_off model warnings"
## [1] "Estimates were removed because of matching lower and upper bounds. Originally had 134 estimates, now have 133"
## [2] "estimated parameter 'process[recruit_E].b0' was within 0.001 of upper bound 16.2"
## [3] "estimated parameter 'process[recruit_W].b0' was within 0.001 of upper bound 0.59"
## [4] "estimated parameter 'process[recruit_E].ycs_values{1999}' was within 0.001 of lower bound 0.06"
## [5] "estimated parameter 'process[recruit_W].ycs_values{1999}' was within 0.001 of lower bound 0.06"
## [6] "estimated parameter 'selectivity[sel_Whome].v{7}' was within 0.001 of upper bound 1"
## [7] "estimated parameter 'process[recruit_E].b0' was within 0.001 of upper bound 16.2"
## [8] "estimated parameter 'process[recruit_W].b0' was within 0.001 of upper bound 0.59"
## [9] "estimated parameter 'process[recruit_E].ycs_values{1999}' was within 0.001 of lower bound 0.06"
## [10] "estimated parameter 'process[recruit_W].ycs_values{1999}' was within 0.001 of lower bound 0.06"
## [11] "estimated parameter 'selectivity[sel_Whome].v{7}' was within 0.001 of upper bound 1"
## [1] ""
## [1] "Casal2 adolc_casal_flags_on_low_tol model warnings"
## [1] "Estimates were removed because of matching lower and upper bounds. Originally had 134 estimates, now have 133"
## [2] "estimated parameter 'process[recruit_E].b0' was within 0.001 of upper bound 16.2"
## [3] "estimated parameter 'process[recruit_W].b0' was within 0.001 of upper bound 0.59"
## [4] "estimated parameter 'process[recruit_E].ycs_values{1999}' was within 0.001 of lower bound 0.06"
## [5] "estimated parameter 'process[recruit_W].ycs_values{1999}' was within 0.001 of lower bound 0.06"
## [6] "estimated parameter 'selectivity[sel_Whome].v{7}' was within 0.001 of upper bound 1"
## [7] "estimated parameter 'process[recruit_E].b0' was within 0.001 of upper bound 16.2"
## [8] "estimated parameter 'process[recruit_W].b0' was within 0.001 of upper bound 0.59"
## [9] "estimated parameter 'process[recruit_E].ycs_values{1999}' was within 0.001 of lower bound 0.06"
## [10] "estimated parameter 'process[recruit_W].ycs_values{1999}' was within 0.001 of lower bound 0.06"
## [11] "estimated parameter 'selectivity[sel_Whome].v{7}' was within 0.001 of upper bound 1"
Time series comparisons with CASAL base model results
## [1] "Catch time series base model comparison for run betadiff_casal_flags_on"
## [1] "Actual catches for Ensp1 match: yes"
## [1] "Actual catches for Wnsp1 match: yes"
## [1] "Actual catches for Ensp2 match: yes"
## [1] "Actual catches for Wnsp2 match: yes"
## [1] "Actual catches for Esp match: yes"
## [1] "Actual catches for Wsp match: yes"
## [1] ""
## [1] "Catch time series base model comparison for run betadiff_casal_flags_off"
## [1] "Actual catches for Ensp1 match: yes"
## [1] "Actual catches for Wnsp1 match: yes"
## [1] "Actual catches for Ensp2 match: yes"
## [1] "Actual catches for Wnsp2 match: yes"
## [1] "Actual catches for Esp match: yes"
## [1] "Actual catches for Wsp match: yes"
## [1] ""
## [1] "Catch time series base model comparison for run betadiff_casal_flags_on_low_tol"
## [1] "Actual catches for Ensp1 match: yes"
## [1] "Actual catches for Wnsp1 match: yes"
## [1] "Actual catches for Ensp2 match: yes"
## [1] "Actual catches for Wnsp2 match: yes"
## [1] "Actual catches for Esp match: yes"
## [1] "Actual catches for Wsp match: yes"
## [1] ""
## [1] "Catch time series base model comparison for run adolc_casal_flags_on"
## [1] "Actual catches for Ensp1 match: yes"
## [1] "Actual catches for Wnsp1 match: yes"
## [1] "Actual catches for Ensp2 match: yes"
## [1] "Actual catches for Wnsp2 match: yes"
## [1] "Actual catches for Esp match: yes"
## [1] "Actual catches for Wsp match: yes"
## [1] ""
## [1] "Catch time series base model comparison for run adolc_casal_flags_off"
## [1] "Actual catches for Ensp1 match: yes"
## [1] "Actual catches for Wnsp1 match: yes"
## [1] "Actual catches for Ensp2 match: yes"
## [1] "Actual catches for Wnsp2 match: yes"
## [1] "Actual catches for Esp match: yes"
## [1] "Actual catches for Wsp match: yes"
## [1] ""
## [1] "Catch time series base model comparison for run adolc_casal_flags_on_low_tol"
## [1] "Actual catches for Ensp1 match: yes"
## [1] "Actual catches for Wnsp1 match: yes"
## [1] "Actual catches for Ensp2 match: yes"
## [1] "Actual catches for Wnsp2 match: yes"
## [1] "Actual catches for Esp match: yes"
## [1] "Actual catches for Wsp match: yes"
## [1] ""
Derived quantities
SB0, SBcurrent, MSY, F_MSY, others…
Comparison plots
## [1] "CASAL base parameter correlation range (excluding 1.0): -0.9914 0.9969"
## [1] "CASAL sensitivity 1 parameter correlation range (excluding 1.0): -0.9324 0.9968"
## [1] "Casal2 betadiff_casal_flags_on parameter correlation range (excluding 1.0): -0.890942874908357 0.996776606630884"
## Warning in min(x): no non-missing arguments to min; returning Inf
## Warning in max(x): no non-missing arguments to max; returning -Inf
## [1] "Casal2 betadiff_casal_flags_off parameter correlation range (excluding 1.0): Inf -Inf"
## [1] "Casal2 betadiff_casal_flags_on_low_tol parameter correlation range (excluding 1.0): -0.939452660139753 0.996798182627236"
## [1] "Casal2 adolc_casal_flags_on parameter correlation range (excluding 1.0): -0.883243800438931 0.996698553552037"
## [1] "Casal2 adolc_casal_flags_off parameter correlation range (excluding 1.0): -0.887199176292272 0.996753693490936"
## [1] "Casal2 adolc_casal_flags_on_low_tol parameter correlation range (excluding 1.0): -0.928187528764059 0.99670453783595"